C6ECI3 (C6ECI3_ECOBD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alcohol dehydrogenase zinc-binding domain protein EMBL ACT28917.1

Submitted name:
Predicted oxidoreductase, Zn-dependent and NAD(P)-binding EMBL ACT43597.1

Gene names

Name:	ydjJ EMBL ACT43597.1
Ordered Locus Names:	B21_01731, ECBD_1870, ECD_01743

Organism

Escherichia coli (strain B / BL21-DE3) [Complete proteome] [HAMAP]

Taxonomic identifier

469008 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	347 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Zinc By similarity. RuleBase RU000467
Sequence similarities	Belongs to the zinc-containing alcohol dehydrogenase family. RuleBase RU000468

Ontologies

Keywords
Ligand	Metal-binding RuleBase RU000467 Zinc RuleBase RU000467
Molecular function	Oxidoreductase RuleBase RU000467
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: UniProtKB-KW zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6ECI3 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: F8E2172184626A3B	FASTA	347	37,701
	10 20 30 40 50 60 MKNSKAILQV PGTMKIISAE IPVPKEDEVL IKVEYVGICG SDVHGFESGP FIPPKDPNQE 70 80 90 100 110 120 IGLGHECAGT VVAVGSRVRK FKPGDRVNIE PGVPCGHCRY CLEGKYNICP DVDFMATQPN 130 140 150 160 170 180 YRGALTHYLC HPESFTYKLP DNMDTMEGAL VEPAAVGMHA AMLADVKPGK KIIILGAGCI 190 200 210 220 230 240 GLMTLQACKC LGATEIAVVD VLEKRLAMAE QLGATVVING AKEDTIARCQ QFTEDMGADI 250 260 270 280 290 300 VFETAGSAVT VKQAPYLVMR GGKIMIVGTV PGDSAINFLK INREVTIQTV FRYANRYPVT 310 320 330 340 IEAISSGRFD VKSMVTHIYD YRDVQQAFEE SVNNKRDIIK GVIKISD

References

[1]	"Genome sequences of Escherichia coli B strains REL606 and BL21(DE3)." Jeong H., Barbe V., Lee C.H., Vallenet D., Yu D.S., Choi S.H., Couloux A., Lee S.W., Yoon S.H., Cattolico L., Hur C.G., Park H.S., Segurens B., Kim S.C., Oh T.K., Lenski R.E., Studier F.W., Daegelen P., Kim J.F. J. Mol. Biol. 394:644-652(2009) [PubMed: 19786035] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: B / BL21-DE3 [Korea].
[2]	"Sequencing and gene expression analysis of Escherichia coli BL21." Leparc G., Striedner G., Bayer K., Kreil D., Krempl P.M. Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: B / BL21-DE3 [Austria].
[3]	"Complete sequence of Escherichia coli BL21(DE3)." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sorek R., Rubin E. Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: B / BL21-DE3 [JGI].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001665 Genomic DNA. Translation: ACT28917.1. CP001509 Genomic DNA. Translation: ACT43597.1. AM946981 Genomic DNA. Translation: CAQ32248.1.
3D structure databases
ProteinModelPortal	C6ECI3.
SMR	C6ECI3. Positions 2-347.
ModBase	Search...
Protein-protein interaction databases
STRING	C6ECI3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000159932; EBESCP00000146941; EBESCG00000159505. EBESCT00000190570; EBESCP00000179080; EBESCG00000187373. EBESCT00000192488; EBESCP00000180809; EBESCG00000194033.
GenomeReviews	Gene locus B21_01731 in contig AM946981_GR. Gene locus ECD_01743 in contig CP001509_GR. Gene locus ECBD_1870 in contig CP001665_GR.
KEGG	ebd:ECBD_1870.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000008795.
OMA	KCLGATD.
ProtClustDB	CLSK880192.
Family and domain databases
InterPro	IPR013149. ADH_C. IPR013154. ADH_GroES-like. IPR002085. ADH_SF_Zn-type. IPR002328. ADH_Zn_CS. IPR011032. GroES-like. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
PANTHER	PTHR11695. ADH_Sf_Zn. 1 hit.
Pfam	PF08240. ADH_N. 1 hit. PF00107. ADH_zinc_N. 1 hit. [Graphical view]
SUPFAM	SSF50129. GroES_like. 1 hit.
PROSITE	PS00059. ADH_ZINC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C6ECI3_ECOBD

Accession

Primary (citable) accession number: C6ECI3
Secondary accession number(s): C5W4U7

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)