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C6E9S4 (C6E9S4_ECOBD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=1.6.5.3 EMBL ACT44025.1

NADH:ubiquinone oxidoreductase, membrane subunit L, subunit of NADH:ubiquinone oxidoreductase I EMBL CAQ32680.1
EC=1.6.5.- EMBL CAQ32680.1

Proton-translocating NADH-quinone oxidoreductase, chain L EMBL ACT28446.1
Gene names
Name:nuoL EMBL ACT44025.1
Ordered Locus Names:B21_02163 EMBL CAQ32680.1, ECBD_1383 EMBL ACT28446.1, ECD_02203 EMBL ACT44025.1
OrganismEscherichia coli (strain B / BL21-DE3) [Complete proteome] [HAMAP]
Taxonomic identifier469008 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length613 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein By similarity RuleBase RU000320.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2727 Potential EMBL ACT28446.1
Chain28 – 613586 Potential EMBL ACT28446.1
PRO_5000487357

Sequences

Sequence LengthMass (Da)Tools
C6E9S4 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 7B6C4F7795E67261

FASTA61366,468
        10         20         30         40         50         60 
MNMLALTIIL PLIGFVLLAF SRGRWSENVS AIVGVGSVGL AALVTAFIGV DFFANGEQTY 

        70         80         90        100        110        120 
SQPLWTWMSV GDFNIGFNLV LDGLSLTMLS VVTGVGFLIH MYASWYMRGE EGYSRFFAYT 

       130        140        150        160        170        180 
NLFIASMVVL VLADNLLLMY LGWEGVGLCS YLLIGFYYTD PKNGAAAMKA FVVTRVGDVF 

       190        200        210        220        230        240 
LAFALFILYN ELGTLNFREM VELAPAHFAD GNNMLMWATL MLLGGAVGKS AQLPLQTWLA 

       250        260        270        280        290        300 
DAMAGPTPVS ALIHAATMVT AGVYLIARTH GLFLMTPEVL HLVGIVGAVT LLLAGFAALV 

       310        320        330        340        350        360 
QTDIKRVLAY STMSQIGYMF LALGVQAWDA AIFHLMTHAF FKALLFLASG SVILACHHEQ 

       370        380        390        400        410        420 
NIFKMGGLRK SIPLVYLCFL VGGAALSALP LVTAGFFSKD EILAGAMANG HINLMVAGLV 

       430        440        450        460        470        480 
GAFMTSLYTF RMIFIVFHGK EQIHAHAVKG VTHSLPLIVL LILSTFVGAL IVPPLQGVLP 

       490        500        510        520        530        540 
QTTELAHGSM LTLEITSGVV AVVGILLAAW LWLGKRTLVT SIANSAPGRL LSTWWYNAWG 

       550        560        570        580        590        600 
FDWLYDKVFV KPFLGIAWLL KRDPLNSMMN IPAVLSRFAG KGLLLSENGY LRWYVASMSI 

       610 
GAVVVLALLM VLR 

« Hide

References

« Hide 'large scale' references
[1]"Sequencing and gene expression analysis of Escherichia coli BL21(DE3)."
Krempl P.M., Mairhofer J., Eisenkolb M., Specht T., Leparc G.G., Kreil D.P., Bayer K., Striedner G.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BL21 EMBL CAQ32680.1.
[2]"Genome sequences of Escherichia coli B strains REL606 and BL21(DE3)."
Jeong H., Barbe V., Lee C.H., Vallenet D., Yu D.S., Choi S.H., Couloux A., Lee S.W., Yoon S.H., Cattolico L., Hur C.G., Park H.S., Segurens B., Kim S.C., Oh T.K., Lenski R.E., Studier F.W., Daegelen P., Kim J.F.
J. Mol. Biol. 394:644-652(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / BL21-DE3 [Korea] and BL21 EMBL ACT44025.1.
[3]"Sequencing and gene expression analysis of Escherichia coli BL21."
Leparc G., Striedner G., Bayer K., Kreil D., Krempl P.M.
Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / BL21-DE3 [Austria].
[4]"Complete sequence of Escherichia coli 'BL21-Gold(DE3)pLysS AG'."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sorek R., Rubin E.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BL21-Gold EMBL ACT28446.1.
[5]"Complete sequence of Escherichia coli BL21(DE3)."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sorek R., Rubin E.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / BL21-DE3 [JGI].
[6]Jeong H., Shim J.-H., Studier F.W., Oh T.K., Kim J.F.
Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BL21.
[7]"Structure of the membrane domain of respiratory complex I."
Efremov R.G., Sazanov L.A.
Nature 476:414-420(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.00 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001665 Genomic DNA. Translation: ACT28446.1.
CP001509 Genomic DNA. Translation: ACT44025.1.
AM946981 Genomic DNA. Translation: CAQ32680.1.
RefSeqYP_002999942.1. NC_012892.2.
YP_003035631.1. NC_012947.1.
YP_003054796.1. NC_012971.2.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3RKOX-ray3.00B/L1-613[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-59172N.
STRING469008.ECBD_1383.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT28446; ACT28446; ECBD_1383.
ACT44025; ACT44025; ECD_02203.
CAQ32680; CAQ32680; B21_02163.
GeneID8114249.
8156287.
8181253.
KEGGebd:ECBD_1383.
ebe:B21_02163.
ebl:ECD_02203.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1009.
HOGENOMHOG000100570.
KOK00341.
OMATIHTHED.

Family and domain databases

InterProIPR001750. NADH_UbQ/plastoQ_OxRdtase.
IPR001516. NADH_UbQ_OxRdtase_chain5/L_N.
IPR003945. NADHpl_OxRdtase_5.
IPR018393. NADHpl_OxRdtase_5_subgr.
[Graphical view]
PfamPF00361. Oxidored_q1. 1 hit.
PF00662. Oxidored_q1_N. 1 hit.
[Graphical view]
PRINTSPR01435. NPOXDRDTASE5.
TIGRFAMsTIGR01974. NDH_I_L. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6E9S4_ECOBD
AccessionPrimary (citable) accession number: C6E9S4
Secondary accession number(s): C5W715
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)