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C6E9S2

- C6E9S2_ECOBD

UniProt

C6E9S2 - C6E9S2_ECOBD

Protein
Submitted name:

NADH dehydrogenase (Quinone)

Gene

nuoJ

Organism
Escherichia coli (strain B / BL21-DE3)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. NADH dehydrogenase (ubiquinone) activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Keywords - Ligandi

    UbiquinoneImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    NADH dehydrogenase (Quinone)Imported (EC:1.6.99.5Imported)
    Submitted name:
    NADH dehydrogenase subunit JImported (EC:1.6.5.3Imported)
    Submitted name:
    NADH:ubiquinone oxidoreductase, membrane subunit J, subunit of NADH:ubiquinone oxidoreductase IImported (EC:1.6.5.-Imported)
    Gene namesi
    Name:nuoJImported
    Ordered Locus Names:B21_02165Imported, ECBD_1381Imported, ECD_02205Imported
    OrganismiEscherichia coli (strain B / BL21-DE3)Imported
    Taxonomic identifieri469008 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000001509: Chromosome, UP000009074: Chromosome, UP000002032: Chromosome

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-59175N.
    STRINGi469008.ECBD_1381.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3RKOX-ray3.00F/J1-184[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the complex I subunit 6 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0839.
    HOGENOMiHOG000262591.
    KOiK00339.
    OMAiVAYHIGR.

    Family and domain databases

    InterProiIPR001457. NADH_UbQ/plastoQ_OxRdtase_su6.
    [Graphical view]
    PfamiPF00499. Oxidored_q3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C6E9S2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEFAFYICGL IAILATLRVI THTNPVHALL YLIISLLAIS GVFFSLGAYF    50
    AGALEIIVYA GAIMVLFVFV VMMLNLGGSE IEQERQWLKP QVWIGPAILS 100
    AIMLVVIVYA ILGVNDQGID GTPISAKAVG ITLFGPYVLA VELASMLLLA 150
    GLVVAFHVGR EERAGEVLSN RKDDSAKRKT EEHA 184
    Length:184
    Mass (Da):19,875
    Last modified:September 1, 2009 - v1
    Checksum:i9C9D0C9ABAEC7755
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001665 Genomic DNA. Translation: ACT28444.1.
    CP001509 Genomic DNA. Translation: ACT44027.1.
    AM946981 Genomic DNA. Translation: CAQ32682.1.
    RefSeqiYP_002999944.1. NC_012892.2.
    YP_003035629.1. NC_012947.1.
    YP_003054798.1. NC_012971.2.

    Genome annotation databases

    EnsemblBacteriaiACT28444; ACT28444; ECBD_1381.
    ACT44027; ACT44027; ECD_02205.
    CAQ32682; CAQ32682; B21_02165.
    GeneIDi8114247.
    8156285.
    8181255.
    KEGGiebd:ECBD_1381.
    ebe:B21_02165.
    ebl:ECD_02205.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001665 Genomic DNA. Translation: ACT28444.1 .
    CP001509 Genomic DNA. Translation: ACT44027.1 .
    AM946981 Genomic DNA. Translation: CAQ32682.1 .
    RefSeqi YP_002999944.1. NC_012892.2.
    YP_003035629.1. NC_012947.1.
    YP_003054798.1. NC_012971.2.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3RKO X-ray 3.00 F/J 1-184 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-59175N.
    STRINGi 469008.ECBD_1381.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT28444 ; ACT28444 ; ECBD_1381 .
    ACT44027 ; ACT44027 ; ECD_02205 .
    CAQ32682 ; CAQ32682 ; B21_02165 .
    GeneIDi 8114247.
    8156285.
    8181255.
    KEGGi ebd:ECBD_1381.
    ebe:B21_02165.
    ebl:ECD_02205.

    Phylogenomic databases

    eggNOGi COG0839.
    HOGENOMi HOG000262591.
    KOi K00339.
    OMAi VAYHIGR.

    Family and domain databases

    InterProi IPR001457. NADH_UbQ/plastoQ_OxRdtase_su6.
    [Graphical view ]
    Pfami PF00499. Oxidored_q3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequencing and gene expression analysis of Escherichia coli BL21(DE3)."
      Krempl P.M., Mairhofer J., Eisenkolb M., Specht T., Leparc G.G., Kreil D.P., Bayer K., Striedner G.
      Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BL21Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: B / BL21-DE3 [Austria], B / BL21-DE3 [JGI], B / BL21-DE3 [Korea]Imported and BL21Imported.
    3. "Sequencing and gene expression analysis of Escherichia coli BL21."
      Leparc G., Striedner G., Bayer K., Kreil D., Krempl P.M.
      Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: B / BL21-DE3 [Austria]Imported.
    4. "Complete sequence of Escherichia coli 'BL21-Gold(DE3)pLysS AG'."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sorek R., Rubin E.
      Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BL21-GoldImported.
    5. "Complete sequence of Escherichia coli BL21(DE3)."
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sorek R., Rubin E.
      Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: B / BL21-DE3 [JGI]Imported.
    6. Jeong H., Shim J.-H., Studier F.W., Oh T.K., Kim J.F.
      Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BL21.
    7. "Structure of the membrane domain of respiratory complex I."
      Efremov R.G., Sazanov L.A.
      Nature 476:414-420(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.00 ANGSTROMS).

    Entry informationi

    Entry nameiC6E9S2_ECOBD
    AccessioniPrimary (citable) accession number: C6E9S2
    Secondary accession number(s): C5W717
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteomeImported

    External Data

    Dasty 3