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C6E9S2

- C6E9S2_ECOBD

UniProt

C6E9S2 - C6E9S2_ECOBD

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Protein
Submitted name:

NADH dehydrogenase (Quinone)

Gene

nuoJ

Organism
Escherichia coli (strain B / BL21-DE3)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. NADH dehydrogenase (ubiquinone) activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Keywords - Ligandi

UbiquinoneImported

Names & Taxonomyi

Protein namesi
Submitted name:
NADH dehydrogenase (Quinone)Imported (EC:1.6.99.5Imported)
Submitted name:
NADH dehydrogenase subunit JImported (EC:1.6.5.3Imported)
Submitted name:
NADH:ubiquinone oxidoreductase, membrane subunit J, subunit of NADH:ubiquinone oxidoreductase IImported (EC:1.6.5.-Imported)
Gene namesi
Name:nuoJImported
Ordered Locus Names:B21_02165Imported, ECBD_1381Imported, ECD_02205Imported
OrganismiEscherichia coli (strain B / BL21-DE3)Imported
Taxonomic identifieri469008 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000001509: Chromosome, UP000002032: Chromosome, UP000009074: Chromosome

Interactioni

Protein-protein interaction databases

DIPiDIP-59175N.
STRINGi469008.ECBD_1381.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3RKOX-ray3.00F/J1-184[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the complex I subunit 6 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0839.
HOGENOMiHOG000262591.
KOiK00339.
OMAiVAYHIGR.

Family and domain databases

InterProiIPR001457. NADH_UbQ/plastoQ_OxRdtase_su6.
[Graphical view]
PfamiPF00499. Oxidored_q3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6E9S2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEFAFYICGL IAILATLRVI THTNPVHALL YLIISLLAIS GVFFSLGAYF
60 70 80 90 100
AGALEIIVYA GAIMVLFVFV VMMLNLGGSE IEQERQWLKP QVWIGPAILS
110 120 130 140 150
AIMLVVIVYA ILGVNDQGID GTPISAKAVG ITLFGPYVLA VELASMLLLA
160 170 180
GLVVAFHVGR EERAGEVLSN RKDDSAKRKT EEHA
Length:184
Mass (Da):19,875
Last modified:September 1, 2009 - v1
Checksum:i9C9D0C9ABAEC7755
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001665 Genomic DNA. Translation: ACT28444.1.
CP001509 Genomic DNA. Translation: ACT44027.1.
AM946981 Genomic DNA. Translation: CAQ32682.1.
RefSeqiYP_002999944.1. NC_012892.2.
YP_003035629.1. NC_012947.1.
YP_003054798.1. NC_012971.2.

Genome annotation databases

EnsemblBacteriaiACT28444; ACT28444; ECBD_1381.
ACT44027; ACT44027; ECD_02205.
CAQ32682; CAQ32682; B21_02165.
GeneIDi8114247.
8156285.
8181255.
KEGGiebd:ECBD_1381.
ebe:B21_02165.
ebl:ECD_02205.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001665 Genomic DNA. Translation: ACT28444.1 .
CP001509 Genomic DNA. Translation: ACT44027.1 .
AM946981 Genomic DNA. Translation: CAQ32682.1 .
RefSeqi YP_002999944.1. NC_012892.2.
YP_003035629.1. NC_012947.1.
YP_003054798.1. NC_012971.2.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3RKO X-ray 3.00 F/J 1-184 [» ]
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-59175N.
STRINGi 469008.ECBD_1381.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT28444 ; ACT28444 ; ECBD_1381 .
ACT44027 ; ACT44027 ; ECD_02205 .
CAQ32682 ; CAQ32682 ; B21_02165 .
GeneIDi 8114247.
8156285.
8181255.
KEGGi ebd:ECBD_1381.
ebe:B21_02165.
ebl:ECD_02205.

Phylogenomic databases

eggNOGi COG0839.
HOGENOMi HOG000262591.
KOi K00339.
OMAi VAYHIGR.

Family and domain databases

InterProi IPR001457. NADH_UbQ/plastoQ_OxRdtase_su6.
[Graphical view ]
Pfami PF00499. Oxidored_q3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequencing and gene expression analysis of Escherichia coli BL21(DE3)."
    Krempl P.M., Mairhofer J., Eisenkolb M., Specht T., Leparc G.G., Kreil D.P., Bayer K., Striedner G.
    Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BL21Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B / BL21-DE3 [Korea]Imported and BL21Imported.
  3. "Sequencing and gene expression analysis of Escherichia coli BL21."
    Leparc G., Striedner G., Bayer K., Kreil D., Krempl P.M.
    Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B / BL21-DE3 [Austria]Imported.
  4. "Complete sequence of Escherichia coli 'BL21-Gold(DE3)pLysS AG'."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sorek R., Rubin E.
    Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BL21-GoldImported.
  5. "Complete sequence of Escherichia coli BL21(DE3)."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sorek R., Rubin E.
    Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B / BL21-DE3 [JGI]Imported.
  6. Jeong H., Shim J.-H., Studier F.W., Oh T.K., Kim J.F.
    Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BL21.
  7. "Structure of the membrane domain of respiratory complex I."
    Efremov R.G., Sazanov L.A.
    Nature 476:414-420(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.00 ANGSTROMS).

Entry informationi

Entry nameiC6E9S2_ECOBD
AccessioniPrimary (citable) accession number: C6E9S2
Secondary accession number(s): C5W717
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: October 29, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteomeImported

External Data

Dasty 3