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C6E8R4 (C6E8R4_GEOSM) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:GM21_0117 EMBL ACT16203.1
OrganismGeobacter sp. (strain M21) [Complete proteome] [HAMAP] EMBL ACT16203.1
Taxonomic identifier443144 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter

Protein attributes

Sequence length1116 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C6E8R4 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 3FAB6AD169A1B70B

FASTA1,116128,503
        10         20         30         40         50         60 
MPQRSDKNPL WFKDAIVYEV HIRSFCDSNG DGIGDFRGLL QKLPYLRDLG ITAVWVLPFY 

        70         80         90        100        110        120 
PSPLKDDGYD IADYRSVHPD YGTLRDFQDF LKGAHALGMR VITELVLNHT SDQHPWFQKS 

       130        140        150        160        170        180 
RTSKPGSPWR DFYVWSDTPD KYLDARIIFK DFEVSNWTRD PVAKSYFWHR FYSHQPDLNY 

       190        200        210        220        230        240 
DNPRVHEAMF RVIDFWLGMG VDGLRLDAVP YLYEREGTNC ENLPETYEFL KKLRAYIDAK 

       250        260        270        280        290        300 
YPDRMLLAEA NQWPEDAASY FGGGAACQMC FHFPLMPRMF MALQMEDSFP IINILQQTPV 

       310        320        330        340        350        360 
IPQQCQWALF LRNHDELTLE MVTDEERDYM YRIYARDPRA RINLGIRRRL APLMGDDRRK 

       370        380        390        400        410        420 
IELMNVLLFC LPGTPIIYYG DEIGMGDNYY LGDRNGVRTP MQWSPDRNAG FSPVNPQKLY 

       430        440        450        460        470        480 
LPAIIDPEYH YEARNVENQA KNPSSLLWWM KRMIDLRKRF KAFGWGSVEF MPLENSKVLA 

       490        500        510        520        530        540 
MVRKYEDQAI LVLINLSRAT QFVQVNQPRF VGFYPEEMFS RNRFPVIKDS PYGVILGAYD 

       550        560        570        580        590        600 
YHLLLMKDGS EEVKPREEGV LEEVPVTGSW ENVLRSAGLR QLEQSVLPEY LKRSRWFQGK 

       610        620        630        640        650        660 
SRIMVRFSVM EKIPVPVNSS SVILTLLEVS YSEGAPETYL LPLHFVPMDG GGEGILTETP 

       670        680        690        700        710        720 
AAVVCKLRIG DKVGILYDGT YNSHFRWALF EMIWRRKAIR TDGGRFSGRP ASGMGALMEG 

       730        740        750        760        770        780 
KEPPFVSQVG KSEQSNTSML FDKHFFLKLY RRLEEGAHPE VEIGRFLSDR IRFQHVAPLA 

       790        800        810        820        830        840 
GTIEYRRPGL EPVAIGMLQA FVPNQGDAWA FTLGEAGQFV DRVLAHREEA KESGTPAVSQ 

       850        860        870        880        890        900 
PDTAATGFST VLHDLIQGLY PEMVTLIGKR TAELHLALSS RSDDPSFAPE PFALLYQRSV 

       910        920        930        940        950        960 
YQSMRSRTRK AFDLLRRNLG RLPQELVQEA EALLGMEPEV QGALQKFTIS KFSAMKTRVH 

       970        980        990       1000       1010       1020 
GDYHLGQLLY TGDDFLIMDF EGEPVKSLGE RRIKQSPLRD VAAMMRSFEY AGHAVLMQRT 

      1030       1040       1050       1060       1070       1080 
QVREEDVAFL LPWIQAWCRY NSSLFLASYQ KKVEGCNFMP DNPQDVETML RCFMLDKAVY 

      1090       1100       1110 
ELGYELNNRP DWVSIPLRGI MNLLASEKSV PKLEGQ 

« Hide

References

[1]"Complete sequence of Geobacter sp. M21."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Lovley D.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: M21 EMBL ACT16203.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001661 Genomic DNA. Translation: ACT16203.1.
RefSeqYP_003019961.1. NC_012918.1.

3D structure databases

ProteinModelPortalC6E8R4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING443144.GM21_0117.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT16203; ACT16203; GM21_0117.
GeneID8135420.
KEGGgem:GM21_0117.
PATRIC22014726. VBIGeoSp56140_0119.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMARDGTNNE.
OrthoDBEOG6RVFV2.
ProtClustDBCLSK2507703.

Enzyme and pathway databases

BioCycGSP443144:GHKM-121-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6E8R4_GEOSM
AccessionPrimary (citable) accession number: C6E8R4
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: November 13, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)