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C6DNH1

- C6DNH1_MYCTK

UniProt

C6DNH1 - C6DNH1_MYCTK

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Protein
Submitted name: DNA ligase LigD
Gene
TBMG_03775, V460_00154
Organism
Mycobacterium tuberculosis (strain KZN 1435 / MDR)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMTUB478434:GH8E-3906-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase LigDImported
    Gene namesi
    Ordered Locus Names:TBMG_03775Imported
    ORF Names:V460_00154Imported
    OrganismiMycobacterium tuberculosis (strain KZN 1435 / MDR)
    Taxonomic identifieri478434 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
    ProteomesiUP000002737: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi478434.TBMG_03775.

    Structurei

    3D structure databases

    ProteinModelPortaliC6DNH1.
    SMRiC6DNH1. Positions 14-298.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000244654.
    KOiK01971.
    OMAiFHPWPVR.
    OrthoDBiEOG6FV833.

    Family and domain databases

    InterProiIPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view]
    PfamiPF01896. DNA_primase_S. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6DNH1-1 [UniParc]FASTAAdd to Basket

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    MAAAAEELDV DGIAVRLTSP DRMYFPKLGS HGTKRRLVEY YFAVAGGPML    50
    TALRDRPTHL QRFPDGVDGE QIYQKRIPRH RPDYLQTCRV TFPSGRMADA 100
    LKVTHPAAIV WAAQMGTITL HPWQVRCPDT EHPDELRIDL DPQPGTGFVE 150
    ARTVAVDVLR SVLDDLGLVG YPKTSGGRGI HVFLRIATDW DFVEVRRAGI 200
    ALAREVERRA PDAVTTSWWK EERGARIFID FNQNARDRTM ASAYSVRPTP 250
    IATVSMPLTW EELAGADPDD YTMTTVPELV KIRDDPWAGM DDVAQSIAPL 300
    LDLAAADEER GLGDMPYPPN YPKMPGEPKR VQPSRDTDLK GGNTSK 346
    Length:346
    Mass (Da):38,544
    Last modified:September 1, 2009 - v1
    Checksum:i11E77E93FBCD155B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001658 Genomic DNA. Translation: ACT26883.1.
    JLCO01000001 Genomic DNA. Translation: KBN06218.1.
    RefSeqiYP_003033778.1. NC_012943.1.

    Genome annotation databases

    EnsemblBacteriaiACT26883; ACT26883; TBMG_03775.
    GeneIDi8164588.
    KEGGimtb:TBMG_03775.
    PATRICi18165784. VBIMycTub122270_4173.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001658 Genomic DNA. Translation: ACT26883.1 .
    JLCO01000001 Genomic DNA. Translation: KBN06218.1 .
    RefSeqi YP_003033778.1. NC_012943.1.

    3D structure databases

    ProteinModelPortali C6DNH1.
    SMRi C6DNH1. Positions 14-298.
    ModBasei Search...

    Protein-protein interaction databases

    STRINGi 478434.TBMG_03775.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT26883 ; ACT26883 ; TBMG_03775 .
    GeneIDi 8164588.
    KEGGi mtb:TBMG_03775.
    PATRICi 18165784. VBIMycTub122270_4173.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000244654.
    KOi K01971.
    OMAi FHPWPVR.
    OrthoDBi EOG6FV833.

    Enzyme and pathway databases

    BioCyci MTUB478434:GH8E-3906-MONOMER.

    Family and domain databases

    InterProi IPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view ]
    Pfami PF01896. DNA_primase_S. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    ProtoNeti Search...

    Publicationsi

    « Hide 'large scale' publications
    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KZN 1435 / MDR.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: KZN 1435Imported.

    Entry informationi

    Entry nameiC6DNH1_MYCTK
    AccessioniPrimary (citable) accession number: C6DNH1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: July 9, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    External Data

    Dasty 3
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