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C6DNH1

- C6DNH1_MYCTK

UniProt

C6DNH1 - C6DNH1_MYCTK

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Protein
Submitted name:

DNA ligase LigD

Gene
TBMG_03775, V460_00154
Organism
Mycobacterium tuberculosis (strain KZN 1435 / MDR)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMTUB478434:GH8E-3906-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase LigDImported
Gene namesi
Ordered Locus Names:TBMG_03775Imported
ORF Names:V460_00154Imported
OrganismiMycobacterium tuberculosis (strain KZN 1435 / MDR)
Taxonomic identifieri478434 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
ProteomesiUP000002737: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi478434.TBMG_03775.

Structurei

3D structure databases

ProteinModelPortaliC6DNH1.
SMRiC6DNH1. Positions 14-298.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
KOiK01971.
OMAiFHPWPVR.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

C6DNH1-1 [UniParc]FASTAAdd to Basket

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MAAAAEELDV DGIAVRLTSP DRMYFPKLGS HGTKRRLVEY YFAVAGGPML    50
TALRDRPTHL QRFPDGVDGE QIYQKRIPRH RPDYLQTCRV TFPSGRMADA 100
LKVTHPAAIV WAAQMGTITL HPWQVRCPDT EHPDELRIDL DPQPGTGFVE 150
ARTVAVDVLR SVLDDLGLVG YPKTSGGRGI HVFLRIATDW DFVEVRRAGI 200
ALAREVERRA PDAVTTSWWK EERGARIFID FNQNARDRTM ASAYSVRPTP 250
IATVSMPLTW EELAGADPDD YTMTTVPELV KIRDDPWAGM DDVAQSIAPL 300
LDLAAADEER GLGDMPYPPN YPKMPGEPKR VQPSRDTDLK GGNTSK 346
Length:346
Mass (Da):38,544
Last modified:September 1, 2009 - v1
Checksum:i11E77E93FBCD155B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001658 Genomic DNA. Translation: ACT26883.1.
JLCO01000001 Genomic DNA. Translation: KBN06218.1.
RefSeqiYP_003033778.1. NC_012943.1.

Genome annotation databases

EnsemblBacteriaiACT26883; ACT26883; TBMG_03775.
GeneIDi8164588.
KEGGimtb:TBMG_03775.
PATRICi18165784. VBIMycTub122270_4173.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001658 Genomic DNA. Translation: ACT26883.1 .
JLCO01000001 Genomic DNA. Translation: KBN06218.1 .
RefSeqi YP_003033778.1. NC_012943.1.

3D structure databases

ProteinModelPortali C6DNH1.
SMRi C6DNH1. Positions 14-298.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 478434.TBMG_03775.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT26883 ; ACT26883 ; TBMG_03775 .
GeneIDi 8164588.
KEGGi mtb:TBMG_03775.
PATRICi 18165784. VBIMycTub122270_4173.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000244654.
KOi K01971.
OMAi FHPWPVR.
OrthoDBi EOG6FV833.

Enzyme and pathway databases

BioCyci MTUB478434:GH8E-3906-MONOMER.

Family and domain databases

InterProi IPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view ]
Pfami PF01896. DNA_primase_S. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KZN 1435 / MDR.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: KZN 1435Imported.

Entry informationi

Entry nameiC6DNH1_MYCTK
AccessioniPrimary (citable) accession number: C6DNH1
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: July 9, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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