C6DKG9 (GCP_PECCP) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp

Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein

Gene names

Name:	gcp
Ordered Locus Names:	PC1_0551

Organism

Pectobacterium carotovorum subsp. carotovorum (strain PC1) [Complete proteome] [HAMAP]

Taxonomic identifier

561230 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pectobacterium

Protein attributes

Sequence length	337 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445
Subcellular location	Cytoplasm Potential HAMAP MF_01445.
Sequence similarities	Belongs to the KAE1 / YgjD family.

Ontologies

Keywords
Biological process	tRNA processing
Cellular component	Cytoplasm
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: InterPro tRNA processing Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 337	337	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445		PRO_1000215305

Sequences

	Sequence		Length	Mass (Da)
	C6DKG9 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: E1CEF222A55FCB5C	FASTA	337	35,757
	10 20 30 40 50 60 MRVLGIETSC DETGVAIYDT ETGLLANQLY SQVKLHADYG GVVPELASRD HVRKTVPLIQ 70 80 90 100 110 120 AALREAGLQA GDIDGVAYTA GPGLVGALLV GATVGRSLAF AWDVPAIPVH HMEGHLLAPM 130 140 150 160 170 180 LEDNPPAFPF VALLVSGGHT QLISVTGIGE YRLLGESIDD AAGEAFDKTA KLLGLDYPGG 190 200 210 220 230 240 PMLSKMAQAG DSQRFTFPRP MTDRPGLDFS FSGLKTFAAN TIRSNGDDDQ TRADIARAFE 250 260 270 280 290 300 DAVVDTLAIK CRRALDETGF KRLVMAGGVS ANRTLRQCLG DVMAKRGGEV FYARPEFCTD 310 320 330 NGAMIAYAGS VRLAHGASQT LGVSVRPRWP LAELPAV

References

[1]

"Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Balakrishnan V., Glasner J., Perna N.T. Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PC1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001657 Genomic DNA. Translation: ACT11606.1.
RefSeq	YP_003016142.1. NC_012917.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C6DKG9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8131469.
GenomeReviews	Gene locus PC1_0551 in contig CP001657_GR.
KEGG	pct:PC1_0551.
PATRIC	20485668. VBIPecCar70489_0545.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	MEVIGQT.
ProtClustDB	PRK09604.
Family and domain databases
HAMAP	MF_01445. gcp. [Tree]
InterPro	IPR022450. Pept_M22_O-sialoglycopept. IPR000905. Peptidase_M22. IPR017860. Peptidase_M22_CS. IPR017861. Peptidase_M22_subgr. [Graphical view]
KO	K01409.
Pfam	PF00814. Peptidase_M22. 1 hit. [Graphical view]
PRINTS	PR00789. OSIALOPTASE.
TIGRFAMs	TIGR03723. Bact_gcp. 1 hit. TIGR00329. Gcp_kae1. 1 hit.
PROSITE	PS01016. GLYCOPROTEASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

GCP_PECCP

Accession

Primary (citable) accession number: C6DKG9

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 22, 2009
Last sequence update:	September 1, 2009
Last modified:	January 25, 2012
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program