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C6DI06

- C6DI06_PECCP

UniProt

C6DI06 - C6DI06_PECCP

Protein
Submitted name:

Glycoside hydrolase family 1

Gene

PC1_2140

Organism
Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Enzyme and pathway databases

    BioCyciPCAR561230:GKCK-2185-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glycoside hydrolase family 1Imported
    Gene namesi
    Ordered Locus Names:PC1_2140Imported
    OrganismiPectobacterium carotovorum subsp. carotovorum (strain PC1)Imported
    Taxonomic identifieri561230 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium
    ProteomesiUP000002736: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi561230.PC1_2140.

    Structurei

    3D structure databases

    ProteinModelPortaliC6DI06.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2723.
    HOGENOMiHOG000088631.
    KOiK01223.
    OMAiHEIDAEN.
    OrthoDBiEOG6F81PM.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 1 hit.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
    PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C6DI06-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSASTFPNGF LWGGAIAANQ AEGAYLEGGK GLTTVDMIPH GVNRLPVKLG    50
    QEPRFALRED EFYPSHQAID FYHRYKEDIA LMAEMGFTVF RTSIAWSRLY 100
    PNGDELTPNA EGIAFYRDMF AECKKYNIEP LVTLCHFDVP MHLVTEYGSW 150
    RNRKMVEFFA RYARTCFEAF DGLVKYWLTF NEINILLHSP FSGAGLVFAE 200
    GENQEQVKYQ AAHHELVASA LATKIAHEVN PENQVGCMLA GGNFYPWSCK 250
    PEDVWAALNK DRENLFFIDV QARGTYPAYT GRLFKEKGIT IASEPGDDEI 300
    LKNTVDFVSF SYYASRCASA DMNEHNSSAA NIVKSLKNPH IKASEWGWGI 350
    DPLGLRITMN MMYDRYQKPL FLVENGLGAK DEINAQGEID DDYRISYLRE 400
    HISAVADAIG DGIPVIGYTS WGCIDLVAAS TGEMSKRYGF IYVDRDDRGE 450
    GTLARKKKKS FYWYKKVIAS NGADLS 476
    Length:476
    Mass (Da):53,594
    Last modified:September 1, 2009 - v1
    Checksum:i06AB2614E21FDA8C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001657 Genomic DNA. Translation: ACT13179.1.
    RefSeqiWP_015840369.1. NC_012917.1.
    YP_003017715.1. NC_012917.1.

    Genome annotation databases

    EnsemblBacteriaiACT13179; ACT13179; PC1_2140.
    GeneIDi8133084.
    KEGGipct:PC1_2140.
    PATRICi20488922. VBIPecCar70489_2147.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001657 Genomic DNA. Translation: ACT13179.1 .
    RefSeqi WP_015840369.1. NC_012917.1.
    YP_003017715.1. NC_012917.1.

    3D structure databases

    ProteinModelPortali C6DI06.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 561230.PC1_2140.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT13179 ; ACT13179 ; PC1_2140 .
    GeneIDi 8133084.
    KEGGi pct:PC1_2140.
    PATRICi 20488922. VBIPecCar70489_2147.

    Phylogenomic databases

    eggNOGi COG2723.
    HOGENOMi HOG000088631.
    KOi K01223.
    OMAi HEIDAEN.
    OrthoDBi EOG6F81PM.

    Enzyme and pathway databases

    BioCyci PCAR561230:GKCK-2185-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
    PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N.
      , Balakrishnan V., Glasner J., Perna N.T.
      Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PC1Imported.

    Entry informationi

    Entry nameiC6DI06_PECCP
    AccessioniPrimary (citable) accession number: C6DI06
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3