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C6DI06

- C6DI06_PECCP

UniProt

C6DI06 - C6DI06_PECCP

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Protein
Submitted name:

Glycoside hydrolase family 1

Gene
PC1_2140
Organism
Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Enzyme and pathway databases

BioCyciPCAR561230:GKCK-2185-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase family 1Imported
Gene namesi
Ordered Locus Names:PC1_2140Imported
OrganismiPectobacterium carotovorum subsp. carotovorum (strain PC1)Imported
Taxonomic identifieri561230 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium
ProteomesiUP000002736: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi561230.PC1_2140.

Structurei

3D structure databases

ProteinModelPortaliC6DI06.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2723.
HOGENOMiHOG000088631.
KOiK01223.
OMAiHEIDAEN.
OrthoDBiEOG6F81PM.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6DI06-1 [UniParc]FASTAAdd to Basket

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MSASTFPNGF LWGGAIAANQ AEGAYLEGGK GLTTVDMIPH GVNRLPVKLG    50
QEPRFALRED EFYPSHQAID FYHRYKEDIA LMAEMGFTVF RTSIAWSRLY 100
PNGDELTPNA EGIAFYRDMF AECKKYNIEP LVTLCHFDVP MHLVTEYGSW 150
RNRKMVEFFA RYARTCFEAF DGLVKYWLTF NEINILLHSP FSGAGLVFAE 200
GENQEQVKYQ AAHHELVASA LATKIAHEVN PENQVGCMLA GGNFYPWSCK 250
PEDVWAALNK DRENLFFIDV QARGTYPAYT GRLFKEKGIT IASEPGDDEI 300
LKNTVDFVSF SYYASRCASA DMNEHNSSAA NIVKSLKNPH IKASEWGWGI 350
DPLGLRITMN MMYDRYQKPL FLVENGLGAK DEINAQGEID DDYRISYLRE 400
HISAVADAIG DGIPVIGYTS WGCIDLVAAS TGEMSKRYGF IYVDRDDRGE 450
GTLARKKKKS FYWYKKVIAS NGADLS 476
Length:476
Mass (Da):53,594
Last modified:September 1, 2009 - v1
Checksum:i06AB2614E21FDA8C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001657 Genomic DNA. Translation: ACT13179.1.
RefSeqiWP_015840369.1. NC_012917.1.
YP_003017715.1. NC_012917.1.

Genome annotation databases

EnsemblBacteriaiACT13179; ACT13179; PC1_2140.
GeneIDi8133084.
KEGGipct:PC1_2140.
PATRICi20488922. VBIPecCar70489_2147.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001657 Genomic DNA. Translation: ACT13179.1 .
RefSeqi WP_015840369.1. NC_012917.1.
YP_003017715.1. NC_012917.1.

3D structure databases

ProteinModelPortali C6DI06.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 561230.PC1_2140.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT13179 ; ACT13179 ; PC1_2140 .
GeneIDi 8133084.
KEGGi pct:PC1_2140.
PATRICi 20488922. VBIPecCar70489_2147.

Phylogenomic databases

eggNOGi COG2723.
HOGENOMi HOG000088631.
KOi K01223.
OMAi HEIDAEN.
OrthoDBi EOG6F81PM.

Enzyme and pathway databases

BioCyci PCAR561230:GKCK-2185-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N.
    , Balakrishnan V., Glasner J., Perna N.T.
    Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PC1Imported.

Entry informationi

Entry nameiC6DI06_PECCP
AccessioniPrimary (citable) accession number: C6DI06
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: September 3, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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