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C6DH98

- GLPB_PECCP

UniProt

C6DH98 - GLPB_PECCP

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Protein

Anaerobic glycerol-3-phosphate dehydrogenase subunit B

Gene
glpB, PC1_3956
Organism
Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor By similarity.UniRule annotation

Catalytic activityi

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotation

Cofactori

FMN By similarity.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC

GO - Biological processi

  1. glycerol catabolic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

Flavoprotein, FMN

Enzyme and pathway databases

BioCyciPCAR561230:GKCK-4044-MONOMER.
UniPathwayiUPA00618; UER00673.

Names & Taxonomyi

Protein namesi
Recommended name:
Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC:1.1.5.3)
Short name:
Anaerobic G-3-P dehydrogenase subunit B
Short name:
Anaerobic G3Pdhase B
Gene namesi
Name:glpB
Ordered Locus Names:PC1_3956
OrganismiPectobacterium carotovorum subsp. carotovorum (strain PC1)
Taxonomic identifieri561230 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium
ProteomesiUP000002736: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 420420Anaerobic glycerol-3-phosphate dehydrogenase subunit BUniRule annotationPRO_1000212851Add
BLAST

Interactioni

Subunit structurei

Composed of a catalytic GlpA/B dimer and of membrane bound GlpC By similarity.

Protein-protein interaction databases

STRINGi561230.PC1_3956.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG3075.
HOGENOMiHOG000278489.
KOiK00112.
OMAiFRSVNIS.
OrthoDBiEOG6K6V62.

Family and domain databases

HAMAPiMF_00753. Glycerol3P_GlpB.
InterProiIPR003953. FAD_bind_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
[Graphical view]
PIRSFiPIRSF000141. Anaerobic_G3P_dh. 1 hit.
TIGRFAMsiTIGR03378. glycerol3P_GlpB. 1 hit.

Sequencei

Sequence statusi: Complete.

C6DH98-1 [UniParc]FASTAAdd to Basket

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MRYDVVIIGG GLAGLTCGIR LAEQGKRCAI VSAGQNALHF SSGALDLLSH    50
LPDGQPVSQP LEALDELARQ APHHPYSRMG AAAVAALLPQ VEALLERSTI 100
SLLGSYQQNH WRMTPLGKFR ACWLSPVDGV TRGLPDSRFG DNPLIAGIEG 150
FLDFQSRIVA GTLQAQGIAA RSDDLKLPVL DRLRQNPSEF RAVNIARVLD 200
RPENRAALVE ELSLLANGND AIIMPACLGL DSPEVVGELA EALGKPISLL 250
PTLPPSVLGL RLHQALSQRF RQLGGMVMPG DRAVRASLSA QEIAVHSHHH 300
RDIPLRAKYA VLASGSFFSN GLVTQFDRVT EPVFGLDVRF AEQREGWSQQ 350
DVFVPQPYMQ FGAIVDEHLH PRIGGETIGN LYAIGAVLEG FDPIAQGCGA 400
GVSLLSALHV AEQILKEGNL 420
Length:420
Mass (Da):45,149
Last modified:September 1, 2009 - v1
Checksum:i88CF5FAEF0BBCE9D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001657 Genomic DNA. Translation: ACT14971.1.
RefSeqiYP_003019507.1. NC_012917.1.

Genome annotation databases

EnsemblBacteriaiACT14971; ACT14971; PC1_3956.
GeneIDi8134943.
KEGGipct:PC1_3956.
PATRICi20492680. VBIPecCar70489_3983.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001657 Genomic DNA. Translation: ACT14971.1 .
RefSeqi YP_003019507.1. NC_012917.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 561230.PC1_3956.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT14971 ; ACT14971 ; PC1_3956 .
GeneIDi 8134943.
KEGGi pct:PC1_3956.
PATRICi 20492680. VBIPecCar70489_3983.

Phylogenomic databases

eggNOGi COG3075.
HOGENOMi HOG000278489.
KOi K00112.
OMAi FRSVNIS.
OrthoDBi EOG6K6V62.

Enzyme and pathway databases

UniPathwayi UPA00618 ; UER00673 .
BioCyci PCAR561230:GKCK-4044-MONOMER.

Family and domain databases

HAMAPi MF_00753. Glycerol3P_GlpB.
InterProi IPR003953. FAD_bind_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view ]
Pfami PF00890. FAD_binding_2. 1 hit.
[Graphical view ]
PIRSFi PIRSF000141. Anaerobic_G3P_dh. 1 hit.
TIGRFAMsi TIGR03378. glycerol3P_GlpB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N.
    , Balakrishnan V., Glasner J., Perna N.T.
    Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PC1.

Entry informationi

Entry nameiGLPB_PECCP
AccessioniPrimary (citable) accession number: C6DH98
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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