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C6DH76

- GLGA_PECCP

UniProt

C6DH76 - GLGA_PECCP

Protein

Glycogen synthase

Gene

glgA

Organism
Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 35 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

    Catalytic activityi

    ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei15 – 151ADP-glucoseUniRule annotation

    GO - Molecular functioni

    1. starch synthase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    BioCyciPCAR561230:GKCK-4022-MONOMER.
    UniPathwayiUPA00164.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
    Alternative name(s):
    Starch [bacterial glycogen] synthaseUniRule annotation
    Gene namesi
    Name:glgAUniRule annotation
    Ordered Locus Names:PC1_3934
    OrganismiPectobacterium carotovorum subsp. carotovorum (strain PC1)
    Taxonomic identifieri561230 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium
    ProteomesiUP000002736: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 479479Glycogen synthasePRO_1000206433Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi561230.PC1_3934.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0297.
    HOGENOMiHOG000294941.
    KOiK00703.
    OMAiPYHDESQ.
    OrthoDBiEOG6JTC6Z.

    Family and domain databases

    HAMAPiMF_00484. Glycogen_synth.
    InterProiIPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view]
    PfamiPF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02095. glgA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6DH76-1 [UniParc]FASTAAdd to Basket

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    MRVLHVCSEL FPLLKTGGLA DVAGALPGAQ IAAGMDVRVI LPAFPDLKKG    50
    IANLQVVREL DTFAGHVTLL FGHFNGVGIY LIDVPELYER AGSPYHDPAL 100
    YAYADNYLRF ALLGWMGCEM ACGLDHYWRP DIVHAHDWHA GLTCAYLAAR 150
    NRPAKSIFTV HNLAYQGLFD ARHMPDLHLP REFFQVYGLE FYGQISYLKA 200
    GLYYADHITT VSPTYAHEIT LPAYGYGMEG LLKSREEEGR LSGILNGVDE 250
    MIWNPAHDPL LASHYSRDTL ANKAENKRRL QTAMGLKVDD KVPVFAIVSR 300
    LTSQKGLDIA LSAIPDLLEQ GGQVVVLGAG DADLQEGFLA AAAEYHGQVG 350
    VQIGYHEAFS HRIIGGADVI MVPSRFEPCG LTQLYGLKYG TLPLVRRTGG 400
    LADTVSDCSL ENLADGLASG FVFNDCSVGS LSRAIRRVFV LWSRPTLWRY 450
    VQRQAMAMDF GWQVAAQAYG ALYQRLYTH 479
    Length:479
    Mass (Da):52,813
    Last modified:September 1, 2009 - v1
    Checksum:i0FA72413BCC0C637
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001657 Genomic DNA. Translation: ACT14949.1.
    RefSeqiYP_003019485.1. NC_012917.1.

    Genome annotation databases

    EnsemblBacteriaiACT14949; ACT14949; PC1_3934.
    GeneIDi8134921.
    KEGGipct:PC1_3934.
    PATRICi20492636. VBIPecCar70489_3961.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001657 Genomic DNA. Translation: ACT14949.1 .
    RefSeqi YP_003019485.1. NC_012917.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 561230.PC1_3934.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT14949 ; ACT14949 ; PC1_3934 .
    GeneIDi 8134921.
    KEGGi pct:PC1_3934.
    PATRICi 20492636. VBIPecCar70489_3961.

    Phylogenomic databases

    eggNOGi COG0297.
    HOGENOMi HOG000294941.
    KOi K00703.
    OMAi PYHDESQ.
    OrthoDBi EOG6JTC6Z.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci PCAR561230:GKCK-4022-MONOMER.

    Family and domain databases

    HAMAPi MF_00484. Glycogen_synth.
    InterProi IPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view ]
    Pfami PF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02095. glgA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N.
      , Balakrishnan V., Glasner J., Perna N.T.
      Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PC1.

    Entry informationi

    Entry nameiGLGA_PECCP
    AccessioniPrimary (citable) accession number: C6DH76
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 22, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3