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C6DH76 (GLGA_PECCP) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:PC1_3934
OrganismPectobacterium carotovorum subsp. carotovorum (strain PC1) [Complete proteome] [HAMAP]
Taxonomic identifier561230 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium

Protein attributes

Sequence length479 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 479479Glycogen synthase HAMAP-Rule MF_00484
PRO_1000206433

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
C6DH76 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 0FA72413BCC0C637

FASTA47952,813
        10         20         30         40         50         60 
MRVLHVCSEL FPLLKTGGLA DVAGALPGAQ IAAGMDVRVI LPAFPDLKKG IANLQVVREL 

        70         80         90        100        110        120 
DTFAGHVTLL FGHFNGVGIY LIDVPELYER AGSPYHDPAL YAYADNYLRF ALLGWMGCEM 

       130        140        150        160        170        180 
ACGLDHYWRP DIVHAHDWHA GLTCAYLAAR NRPAKSIFTV HNLAYQGLFD ARHMPDLHLP 

       190        200        210        220        230        240 
REFFQVYGLE FYGQISYLKA GLYYADHITT VSPTYAHEIT LPAYGYGMEG LLKSREEEGR 

       250        260        270        280        290        300 
LSGILNGVDE MIWNPAHDPL LASHYSRDTL ANKAENKRRL QTAMGLKVDD KVPVFAIVSR 

       310        320        330        340        350        360 
LTSQKGLDIA LSAIPDLLEQ GGQVVVLGAG DADLQEGFLA AAAEYHGQVG VQIGYHEAFS 

       370        380        390        400        410        420 
HRIIGGADVI MVPSRFEPCG LTQLYGLKYG TLPLVRRTGG LADTVSDCSL ENLADGLASG 

       430        440        450        460        470 
FVFNDCSVGS LSRAIRRVFV LWSRPTLWRY VQRQAMAMDF GWQVAAQAYG ALYQRLYTH 

« Hide

References

[1]"Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Balakrishnan V., Glasner J., Perna N.T.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PC1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001657 Genomic DNA. Translation: ACT14949.1.
RefSeqYP_003019485.1. NC_012917.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING561230.PC1_3934.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT14949; ACT14949; PC1_3934.
GeneID8134921.
KEGGpct:PC1_3934.
PATRIC20492636. VBIPecCar70489_3961.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAPYHDESQ.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycPCAR561230:GKCK-4022-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_PECCP
AccessionPrimary (citable) accession number: C6DH76
Entry history
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways