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C6DGI8

- C6DGI8_PECCP

UniProt

C6DGI8 - C6DGI8_PECCP

Protein
Submitted name:

Glycoside hydrolase family 1

Gene

PC1_0012

Organism
Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Enzyme and pathway databases

    BioCyciPCAR561230:GKCK-12-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glycoside hydrolase family 1Imported
    Gene namesi
    Ordered Locus Names:PC1_0012Imported
    OrganismiPectobacterium carotovorum subsp. carotovorum (strain PC1)Imported
    Taxonomic identifieri561230 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium
    ProteomesiUP000002736: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi561230.PC1_0012.

    Structurei

    3D structure databases

    ProteinModelPortaliC6DGI8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2723.
    HOGENOMiHOG000088631.
    KOiK01223.
    OMAiREGCADY.
    OrthoDBiEOG6F81PM.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 1 hit.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
    PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C6DGI8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSVQQLPKDF LWGGAVAAHQ VEGGWDQGGK GVSICDVLSG GAHGVDRVIT    50
    DGVQPGVSYP NHQAVEFYSH YKQDVALFAE MGFKCFRTSI AWTRIFPNGD 100
    ELEPNEAGLQ FYDDLFDELL KYNIEPVITL SHFEMPHHLV KQYGGWLNRK 150
    VVDFFVRYSE VVMKRYQSKV KYWMTFNEIN NQRNWQYPLF GYCCSGVIFT 200
    DHDKPEQAMY QTLHHQFVAS AKVVKLGHEI NPNFKIGCML ALVPIYPWSC 250
    HPDDVMFAQE AMRERHLFGD VQLRGYYPSY ILKEWARKGY QIDMQPEDEQ 300
    TLRDGCTDYL GFSYYMSSAV QLAAKGQKKE DSITGFDGGV KNPHVKASEW 350
    GWQIDPVGLR YTLNSFYERY QKPMFIVENG FGAVDKVEAD GSINDDYRIE 400
    YLKAHIDQMK KAVVEDGVEL MGYTPWGCID CVSFTTGQYS KRYGFIYVDK 450
    HDDGTGTFKR SKKKSFDWYK KVISSNGAEL 480
    Length:480
    Mass (Da):55,131
    Last modified:September 1, 2009 - v1
    Checksum:iB42E8FE09AFA514F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001657 Genomic DNA. Translation: ACT11075.1.
    RefSeqiYP_003015611.1. NC_012917.1.

    Genome annotation databases

    EnsemblBacteriaiACT11075; ACT11075; PC1_0012.
    GeneIDi8130912.
    KEGGipct:PC1_0012.
    PATRICi20484570. VBIPecCar70489_0012.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001657 Genomic DNA. Translation: ACT11075.1 .
    RefSeqi YP_003015611.1. NC_012917.1.

    3D structure databases

    ProteinModelPortali C6DGI8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 561230.PC1_0012.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT11075 ; ACT11075 ; PC1_0012 .
    GeneIDi 8130912.
    KEGGi pct:PC1_0012.
    PATRICi 20484570. VBIPecCar70489_0012.

    Phylogenomic databases

    eggNOGi COG2723.
    HOGENOMi HOG000088631.
    KOi K01223.
    OMAi REGCADY.
    OrthoDBi EOG6F81PM.

    Enzyme and pathway databases

    BioCyci PCAR561230:GKCK-12-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
    PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N.
      , Balakrishnan V., Glasner J., Perna N.T.
      Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PC1Imported.

    Entry informationi

    Entry nameiC6DGI8_PECCP
    AccessioniPrimary (citable) accession number: C6DGI8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3