C6DGI8 (C6DGI8_PECCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase family 1 EMBL ACT11075.1

Gene names

Ordered Locus Names:

PC1_0012

Organism

Pectobacterium carotovorum subsp. carotovorum (strain PC1) [Complete proteome] [HAMAP] EMBL ACT11075.1

Taxonomic identifier

561230 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pectobacterium › Erwinia carotovora › Pectobacterium carotovorum subsp. carotovorum

Protein attributes

Sequence length	480 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU004468 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6DGI8 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: B42E8FE09AFA514F	FASTA	480	55,131
	10 20 30 40 50 60 MSVQQLPKDF LWGGAVAAHQ VEGGWDQGGK GVSICDVLSG GAHGVDRVIT DGVQPGVSYP 70 80 90 100 110 120 NHQAVEFYSH YKQDVALFAE MGFKCFRTSI AWTRIFPNGD ELEPNEAGLQ FYDDLFDELL 130 140 150 160 170 180 KYNIEPVITL SHFEMPHHLV KQYGGWLNRK VVDFFVRYSE VVMKRYQSKV KYWMTFNEIN 190 200 210 220 230 240 NQRNWQYPLF GYCCSGVIFT DHDKPEQAMY QTLHHQFVAS AKVVKLGHEI NPNFKIGCML 250 260 270 280 290 300 ALVPIYPWSC HPDDVMFAQE AMRERHLFGD VQLRGYYPSY ILKEWARKGY QIDMQPEDEQ 310 320 330 340 350 360 TLRDGCTDYL GFSYYMSSAV QLAAKGQKKE DSITGFDGGV KNPHVKASEW GWQIDPVGLR 370 380 390 400 410 420 YTLNSFYERY QKPMFIVENG FGAVDKVEAD GSINDDYRIE YLKAHIDQMK KAVVEDGVEL 430 440 450 460 470 480 MGYTPWGCID CVSFTTGQYS KRYGFIYVDK HDDGTGTFKR SKKKSFDWYK KVISSNGAEL

References

[1]

"Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Balakrishnan V., Glasner J., Perna N.T. Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PC1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001657 Genomic DNA. Translation: ACT11075.1.
RefSeq	YP_003015611.1. NC_012917.1.
3D structure databases
ProteinModelPortal	C6DGI8.
ModBase	Search...
Protein-protein interaction databases
STRING	561230.PC1_0012.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACT11075; ACT11075; PC1_0012.
GeneID	8130912.
KEGG	pct:PC1_0012.
PATRIC	20484570. VBIPecCar70489_0012.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2723.
HOGENOM	HOG000088631.
KO	K01223.
OMA	HVKASEW.
ProtClustDB	CLSK2307647.
Enzyme and pathway databases
BioCyc	PCAR561230:GKCK-12-MONOMER.
Family and domain databases
Gene3D	3.20.20.80. 1 hit.
InterPro	IPR001360. Glyco_hydro_1. IPR018120. Glyco_hydro_1_AS. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
PANTHER	PTHR10353. PTHR10353. 1 hit.
Pfam	PF00232. Glyco_hydro_1. 1 hit. [Graphical view]
PRINTS	PR00131. GLHYDRLASE1.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit. PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C6DGI8_PECCP

Accession

Primary (citable) accession number: C6DGI8

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	May 29, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)