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C6DDX2 (C6DDX2_PECCP) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length228 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionTransferase EMBL ACT12584.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functiontransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6DDX2 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: FE00BA1834DA4B3B

FASTA22825,655
        10         20         30         40         50         60 
MYQLYIANKN YSSWSLRPWV LLKTLSIPFE EKLVAFAPGM AQPAFKAFSP TAKVPCLIDG 

        70         80         90        100        110        120 
ETTVWDSLAI TEYLAEQHPG VWPADAKNRA WARCAAAEMH SGFTALRNTC SMSCGVRVKM 

       130        140        150        160        170        180 
NEISPALRND INRIGELWQE GLTRFGGPFL AGKQFSAVDA FFAPVVFRIK TYQLPVSPEA 

       190        200        210        220 
AAYCDHLLAQ PAMQRWLQDA LAETWREDEH EEEVKKAGEV IEDLRARE 

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References

[1]"Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Balakrishnan V., Glasner J., Perna N.T.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PC1 EMBL ACT12584.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001657 Genomic DNA. Translation: ACT12584.1.
RefSeqYP_003017120.1. NC_012917.1.

3D structure databases

ProteinModelPortalC6DDX2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING561230.PC1_1541.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT12584; ACT12584; PC1_1541.
GeneID8132482.
KEGGpct:PC1_1541.
PATRIC20487730. VBIPecCar70489_1554.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0625.
HOGENOMHOG000147851.
KOK04097.
OMARSACAQM.
OrthoDBEOG66MQMW.
ProtClustDBCLSK557741.

Enzyme and pathway databases

BioCycPCAR561230:GKCK-1583-MONOMER.

Family and domain databases

Gene3D1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamPF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6DDX2_PECCP
AccessionPrimary (citable) accession number: C6DDX2
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: April 16, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)