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C6DCS1 (C6DCS1_PECCP) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PC1_3223
OrganismPectobacterium carotovorum subsp. carotovorum (strain PC1) [Complete proteome] [HAMAP] EMBL ACT14246.1
Taxonomic identifier561230 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium

Protein attributes

Sequence length446 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C6DCS1 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: FEB67B3993E8669D

FASTA44649,160
        10         20         30         40         50         60 
MAHILMAAMA TPGHVYPLLT IARYLVEQGN DVTLFSGALF REQAEAAGVG FIPFSDDIDF 

        70         80         90        100        110        120 
DYRHLEQHFP QRAMLPPGNA QMALALKDFF AAPIPLLDRQ LRDALAKTDA DLLMVENCFY 

       130        140        150        160        170        180 
GVLPLLLSGQ RPPVIVIGVT PLSYSTRDSV FYGPRIPPKL LPPDLSHEQL VDEETQALMS 

       190        200        210        220        230        240 
EVQRAFDHAM MQSGGKPLEQ PFMDALIGRC DRFLQLSTTE LEYQRDDLPQ SVRFIGPLSR 

       250        260        270        280        290        300 
QIAAERVPEW WTSDDSRPLI IVSQGTLANV DLQQLIGPTL RALADLPVRV LATTGGRAVD 

       310        320        330        340        350        360 
SLQPSLPENA RVVRFLSYDD WLPRASIFIT NGGYGSINAA LKDGVPLIVA GVGEDKQESA 

       370        380        390        400        410        420 
ARVVFAKCGI NLQTSTPSEQ QIKQSVIEIL EDPGYLQRAR WIKADYASHD ALALIQAEVH 

       430        440 
ALSFSKEYLS KEDGIASARD ASLLRV 

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References

[1]"Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Balakrishnan V., Glasner J., Perna N.T.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PC1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001657 Genomic DNA. Translation: ACT14246.1.
RefSeqYP_003018782.1. NC_012917.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC6DCS1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8134195.
GenomeReviewsGene locus PC1_3223 in contig CP001657_GR.
KEGGpct:PC1_3223.
PATRIC20491166. VBIPecCar70489_3241.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAGNAQMAL.
ProtClustDBCLSK923410.

Family and domain databases

InterProIPR004276. Glyco_trans_28.
IPR002213. UDP_glucos_trans.
IPR006326. UDPGT_MGT.
[Graphical view]
PANTHERPTHR11926. UDP_glucos_trans. 1 hit.
PfamPF03033. Glyco_transf_28. 1 hit.
PF00201. UDPGT. 1 hit.
[Graphical view]
TIGRFAMsTIGR01426. MGT. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6DCS1_PECCP
AccessionPrimary (citable) accession number: C6DCS1
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: December 14, 2011
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)