C6DAI1 (GLND_PECCP) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
[Protein-PII] uridylyltransferase
Short name=PII uridylyl-transferase
EC=2.7.7.59

Alternative name(s):
UTase
Uridylyl-removing enzyme

Gene names

Name:	glnD
Ordered Locus Names:	PC1_0939

Organism

Pectobacterium carotovorum subsp. carotovorum (strain PC1) [Complete proteome] [HAMAP]

Taxonomic identifier

561230 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pectobacterium › Erwinia carotovora › Pectobacterium carotovorum subsp. carotovorum

Protein attributes

Sequence length	904 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Modifies, by uridylylation or deuridylylation the PII (GlnB) regulatory protein By similarity. HAMAP-Rule MF_00277
Catalytic activity	UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. HAMAP-Rule MF_00277
Sequence similarities	Belongs to the GlnD family.

Ontologies

Keywords
Molecular function	Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	nitrogen fixation Inferred from electronic annotation. Source: HAMAP
Molecular_function	[protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: HAMAP amino acid binding Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 904	904	[Protein-PII] uridylyltransferase HAMAP-Rule MF_00277		PRO_1000204799

Sequences

	Sequence		Length	Mass (Da)
	C6DAI1 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 8B64081DE776F27A	FASTA	904	104,374
	10 20 30 40 50 60 MTDNRFSPDS TPPDASSPDS PVDTIASTQL PASPLTYADD MLNCQTLKQQ LELFQLWLGS 70 80 90 100 110 120 EFRSGVSAEK LIDARTLFID RLLQRLWYFY GFENIAQTSL VAVGGYGRGE LHPLSDIDVL 130 140 150 160 170 180 VLSQTALSEE HSQRVGQFIT LLWDLKLEVG HSVRTLEECL QEGRADISVA TNLIESRMIC 190 200 210 220 230 240 GDVALFLTLQ KHVFSDEFWP SSAFFPAKIA EQQERHQRYH STSYNLEPDI KSSPGGLRDI 250 260 270 280 290 300 HTLLWVARRH FGATSLNEMV GFGFLTEAER KELNECQSFL WRIRFALHLI LPRYDNRLLF 310 320 330 340 350 360 DRQLNVAQLL QYQGEGNTPV ERMMKDFYRM TRRVSELNQM LLQLFDEAIL ALDASEKPRP 370 380 390 400 410 420 IDDEFQLRGN LVDLRDENLF IKKPEAIMRM FYLMVRNRDI SGIYSTTLRQ LRHARRHLAS 430 440 450 460 470 480 PLCTIPEARQ LFMNILRHPH AVSRALLPMH RHSVLWAYMP LWGNIVGQMQ FDLFHAYTVD 490 500 510 520 530 540 EHTIRVLLKL ESFADEETRP QHPLCVELYP RLPQPELLLL AALFHDIAKG RGGDHSELGA 550 560 570 580 590 600 QDVLEFAALH GLNSREAQLV SWLVRCHLLM SVTAQRRDIQ DPTVIQQFAT EVQSETRLRY 610 620 630 640 650 660 LVSLTVADIC ATNETLWNSW KQSLLRELYF ATEKQLRRGM QNTPDLRERV RHHRLQALAL 670 680 690 700 710 720 LRMDNIDEEA LHHIWSRCRA DYFLRHSPNQ LAWHARHLLE HDVNKPLVLI SHQASRGGTE 730 740 750 760 770 780 IFIWSPDRPY LFAAVAGELD RRNLSVHDAQ IFTSRDGMAM DTFIVLEPDG SPLAQDRHEM 790 800 810 820 830 840 IRHALEQALT QRHYQHPRVR RPSPKLRHFS VPTEVNFLPT HTDRRSYMEL SALDQPGLLA 850 860 870 880 890 900 RIGEIFADLN LSLHGARIST IGERVEDLFI LADSDRRALK PELRLKLQER LTEALNPNDK VPLS

References

[1]

"Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Balakrishnan V., Glasner J., Perna N.T. Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PC1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001657 Genomic DNA. Translation: ACT11989.1.
RefSeq	YP_003016525.1. NC_012917.1.
3D structure databases
ProteinModelPortal	C6DAI1.
ModBase	Search...
Protein-protein interaction databases
STRING	561230.PC1_0939.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACT11989; ACT11989; PC1_0939.
GeneID	8131868.
KEGG	pct:PC1_0939.
PATRIC	20486468. VBIPecCar70489_0935.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2844.
HOGENOM	HOG000261778.
KO	K00990.
OMA	SPKVWNA.
ProtClustDB	PRK05007.
Family and domain databases
Gene3D	1.10.3210.10. 1 hit.
HAMAP	MF_00277. PII_uridylyl-transf.
InterPro	IPR002912. ACT_dom. IPR010043. GlnD_Uridyltrans. IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. [Graphical view]
PANTHER	PTHR13734:SF1. PTHR13734:SF1. 1 hit.
Pfam	PF01842. ACT. 2 hits. PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF006288. PII_uridyltransf. 1 hit.
SMART	SM00471. HDc. 1 hit. [Graphical view]
TIGRFAMs	TIGR01693. UTase_glnD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLND_PECCP

Accession

Primary (citable) accession number: C6DAI1

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 22, 2009
Last sequence update:	September 1, 2009
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program