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C6DA71 (C6DA71_PECCP) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length422 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C6DA71 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 263770BBA4F308AF

FASTA42245,870
        10         20         30         40         50         60 
MDTLQTPQAT SPLVTWLHYL EHLHAQAIDL GLERVKQVAE HLHLLQPAPT VFTVAGTNGK 

        70         80         90        100        110        120 
GTTCCTLESI LLAAGLRVGV YSSPHLVRYT ERVRIQGKEL PEAQHTQAFA DIEAGRGAVS 

       130        140        150        160        170        180 
LTYFEFGTLS ALQLFKQANL DVVILEVGLG GRLDATNIVD ADVSVVTSIA IDHTDWLGND 

       190        200        210        220        230        240 
RESIGREKAG IFRQSRPAVV GEPDMPGTIA DVAADKGALL RRRGRDWDYS VQRETWSWQD 

       250        260        270        280        290        300 
KQRELSRLPL PNVPLANAAT ALAALHYSSL NVSEDAIRQG LQHATLPGRF QTVQESPRLI 

       310        320        330        340        350        360 
LDVAHNPHAA AYLANRLAAL PTSGKIRAVV GMLSDKDIAG TLAYLTPLVD EWYCAPLEGP 

       370        380        390        400        410        420 
RGATAQQIAE HLTRSQSFPD VVAAWQQAMS EAAEQDIVIV CGSFHTVAHV MEALDEEKAN 


GE 

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References

[1]"Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Balakrishnan V., Glasner J., Perna N.T.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PC1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001657 Genomic DNA. Translation: ACT13827.1.
RefSeqYP_003018363.1. NC_012917.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING561230.PC1_2797.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT13827; ACT13827; PC1_2797.
GeneID8133750.
KEGGpct:PC1_2797.
PATRIC20490284. VBIPecCar70489_2819.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0285.
HOGENOMHOG000019982.
KOK11754.
OMAVIAIVEH.
ProtClustDBPRK10846.

Family and domain databases

Gene3D3.40.1190.10. 1 hit.
3.90.190.20. 1 hit.
InterProIPR001645. Folylpolyglutamate_synth.
IPR018109. Folylpolyglutamate_synth_CS.
IPR004101. Mur_ligase_C.
IPR013221. Mur_ligase_cen.
[Graphical view]
PANTHERPTHR11136. PTHR11136. 1 hit.
PfamPF02875. Mur_ligase_C. 1 hit.
PF08245. Mur_ligase_M. 1 hit.
[Graphical view]
PIRSFPIRSF001563. Folylpolyglu_synth. 1 hit.
SUPFAMSSF53244. Mur_ligase_C. 1 hit.
SSF53623. Mur_ligase_cen. 1 hit.
TIGRFAMsTIGR01499. folC. 1 hit.
PROSITEPS01011. FOLYLPOLYGLU_SYNT_1. 1 hit.
PS01012. FOLYLPOLYGLU_SYNT_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6DA71_PECCP
AccessionPrimary (citable) accession number: C6DA71
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)