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C6D9C2 (C6D9C2_PECCP) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length471 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C6D9C2 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 7ED465E0B440068A

FASTA47153,575
        10         20         30         40         50         60 
MNELLNVNEQ RDNDELDYNQ VITSEWTQLI ATTSQKSFNL LRAISEQKAS DFADKFYSYM 

        70         80         90        100        110        120 
LKDQEASLFL SSQQVHDRLH GSMSKWIADI LTNTGEHLVD LINHQKKIGQ IHARIGIPVD 

       130        140        150        160        170        180 
LVERGARRLK WHLYEDIAQV AEDKALCFDA MRFASISMDI AIEIMSKTYS QSHDLAAKNE 

       190        200        210        220        230        240 
ESYRLFSILE NASMERERQN ASLLNWENAF IFSVATGTPL SSIQDLSDSE FGLWFNHKGK 

       250        260        270        280        290        300 
SSFSNIQGIR TIASIITETD EYIRGYSTTA LLTQQDYAPL LKAVRSKIYK INMLLGSLFD 

       310        320        330        340        350        360 
EVQKLESGKD TLTLLLNRRF LPTILRHEIS LAMHSSTPLS IAMIDIDHFK TVNDTYGHAA 

       370        380        390        400        410        420 
GDNILKRIAE VLYESTRNSD YVFRYGGEEF MIVLIETPKV AAHTIIERLR KKIQDHPIHL 

       430        440        450        460        470 
QNGESITMTI SAGIAVYSGH PDYECLIKAA DDALYQAKAN GRNRIEYAQE E 

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References

[1]"Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Balakrishnan V., Glasner J., Perna N.T.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PC1 EMBL ACT13649.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001657 Genomic DNA. Translation: ACT13649.1.
RefSeqYP_003018185.1. NC_012917.1.

3D structure databases

ProteinModelPortalC6D9C2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING561230.PC1_2619.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT13649; ACT13649; PC1_2619.
GeneID8133567.
KEGGpct:PC1_2619.
PATRIC20489916. VBIPecCar70489_2640.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2199.
HOGENOMHOG000006777.
KOK13069.
OMAQVITSEW.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycPCAR561230:GKCK-2668-MONOMER.

Family and domain databases

Gene3D1.10.490.10. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR000160. GGDEF_dom.
IPR009050. Globin-like.
IPR012292. Globin_dom.
[Graphical view]
PfamPF00990. GGDEF. 1 hit.
[Graphical view]
SMARTSM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMSSF46458. SSF46458. 1 hit.
SSF55073. SSF55073. 1 hit.
TIGRFAMsTIGR00254. GGDEF. 1 hit.
PROSITEPS50887. GGDEF. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6D9C2_PECCP
AccessionPrimary (citable) accession number: C6D9C2
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)