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C6D9C2

- C6D9C2_PECCP

UniProt

C6D9C2 - C6D9C2_PECCP

Protein
Submitted name:

Diguanylate cyclase

Gene

PC1_2619

Organism
Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. heme binding Source: InterPro
    2. iron ion binding Source: InterPro
    3. oxygen binding Source: InterPro
    4. phosphorus-oxygen lyase activity Source: InterPro

    GO - Biological processi

    1. cyclic nucleotide biosynthetic process Source: InterPro
    2. intracellular signal transduction Source: InterPro
    3. oxygen transport Source: InterPro

    Enzyme and pathway databases

    BioCyciPCAR561230:GKCK-2668-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Diguanylate cyclaseImported
    Gene namesi
    Ordered Locus Names:PC1_2619Imported
    OrganismiPectobacterium carotovorum subsp. carotovorum (strain PC1)Imported
    Taxonomic identifieri561230 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium
    ProteomesiUP000002736: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi561230.PC1_2619.

    Structurei

    3D structure databases

    ProteinModelPortaliC6D9C2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG2199.
    HOGENOMiHOG000006777.
    KOiK13069.
    OMAiQVITSEW.
    OrthoDBiEOG6G4VQG.

    Family and domain databases

    Gene3Di1.10.490.10. 1 hit.
    InterProiIPR001054. A/G_cyclase.
    IPR000160. GGDEF_dom.
    IPR009050. Globin-like.
    IPR012292. Globin_dom.
    [Graphical view]
    PfamiPF00990. GGDEF. 1 hit.
    [Graphical view]
    SMARTiSM00267. GGDEF. 1 hit.
    [Graphical view]
    SUPFAMiSSF46458. SSF46458. 1 hit.
    SSF55073. SSF55073. 1 hit.
    TIGRFAMsiTIGR00254. GGDEF. 1 hit.
    PROSITEiPS50887. GGDEF. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C6D9C2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNELLNVNEQ RDNDELDYNQ VITSEWTQLI ATTSQKSFNL LRAISEQKAS    50
    DFADKFYSYM LKDQEASLFL SSQQVHDRLH GSMSKWIADI LTNTGEHLVD 100
    LINHQKKIGQ IHARIGIPVD LVERGARRLK WHLYEDIAQV AEDKALCFDA 150
    MRFASISMDI AIEIMSKTYS QSHDLAAKNE ESYRLFSILE NASMERERQN 200
    ASLLNWENAF IFSVATGTPL SSIQDLSDSE FGLWFNHKGK SSFSNIQGIR 250
    TIASIITETD EYIRGYSTTA LLTQQDYAPL LKAVRSKIYK INMLLGSLFD 300
    EVQKLESGKD TLTLLLNRRF LPTILRHEIS LAMHSSTPLS IAMIDIDHFK 350
    TVNDTYGHAA GDNILKRIAE VLYESTRNSD YVFRYGGEEF MIVLIETPKV 400
    AAHTIIERLR KKIQDHPIHL QNGESITMTI SAGIAVYSGH PDYECLIKAA 450
    DDALYQAKAN GRNRIEYAQE E 471
    Length:471
    Mass (Da):53,575
    Last modified:September 1, 2009 - v1
    Checksum:i7ED465E0B440068A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001657 Genomic DNA. Translation: ACT13649.1.
    RefSeqiYP_003018185.1. NC_012917.1.

    Genome annotation databases

    EnsemblBacteriaiACT13649; ACT13649; PC1_2619.
    GeneIDi8133567.
    KEGGipct:PC1_2619.
    PATRICi20489916. VBIPecCar70489_2640.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001657 Genomic DNA. Translation: ACT13649.1 .
    RefSeqi YP_003018185.1. NC_012917.1.

    3D structure databases

    ProteinModelPortali C6D9C2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 561230.PC1_2619.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT13649 ; ACT13649 ; PC1_2619 .
    GeneIDi 8133567.
    KEGGi pct:PC1_2619.
    PATRICi 20489916. VBIPecCar70489_2640.

    Phylogenomic databases

    eggNOGi COG2199.
    HOGENOMi HOG000006777.
    KOi K13069.
    OMAi QVITSEW.
    OrthoDBi EOG6G4VQG.

    Enzyme and pathway databases

    BioCyci PCAR561230:GKCK-2668-MONOMER.

    Family and domain databases

    Gene3Di 1.10.490.10. 1 hit.
    InterProi IPR001054. A/G_cyclase.
    IPR000160. GGDEF_dom.
    IPR009050. Globin-like.
    IPR012292. Globin_dom.
    [Graphical view ]
    Pfami PF00990. GGDEF. 1 hit.
    [Graphical view ]
    SMARTi SM00267. GGDEF. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46458. SSF46458. 1 hit.
    SSF55073. SSF55073. 1 hit.
    TIGRFAMsi TIGR00254. GGDEF. 1 hit.
    PROSITEi PS50887. GGDEF. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Pectobacterium carotovorum subsp. carotovorum PC1."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N.
      , Balakrishnan V., Glasner J., Perna N.T.
      Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PC1Imported.

    Entry informationi

    Entry nameiC6D9C2_PECCP
    AccessioniPrimary (citable) accession number: C6D9C2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3