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C6D7U2 (C6D7U2_PAESJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphonoacetaldehyde hydrolase HAMAP-Rule MF_01375
Short name=Phosphonatase HAMAP-Rule MF_01375
EC=3.11.1.1 HAMAP-Rule MF_01375
Alternative name(s):
Phosphonoacetaldehyde phosphonohydrolase HAMAP-Rule MF_01375
Gene names
Name:phnX HAMAP-Rule MF_01375
Ordered Locus Names:Pjdr2_4351
OrganismPaenibacillus sp. (strain JDR-2) [Complete proteome] [HAMAP] EMBL ACT02972.1
Taxonomic identifier324057 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Paenibacillaceae › Paenibacillus

Protein attributes

Sequence length266 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in phosphonate degradation By similarity. HAMAP-Rule MF_01375

Catalytic activity

Phosphonoacetaldehyde + H2O = acetaldehyde + phosphate. HAMAP-Rule MF_01375

Cofactor

Binds 1 Mg2+ ion per subunit By similarity. HAMAP-Rule MF_01375

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_01375

Sequence similarities

Belongs to the HAD-like hydrolase superfamily. PhnX family. HAMAP-Rule MF_01375

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site91Nucleophile By similarity HAMAP-Rule MF_01375
Active site501Schiff-base intermediate with substrate By similarity HAMAP-Rule MF_01375
Metal binding91Magnesium By similarity HAMAP-Rule MF_01375
Metal binding111Magnesium; via carbonyl oxygen By similarity HAMAP-Rule MF_01375
Metal binding1831Magnesium By similarity HAMAP-Rule MF_01375

Sequences

Sequence LengthMass (Da)Tools
C6D7U2 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: BC81273470F1E237

FASTA26629,114
        10         20         30         40         50         60 
MMIKAVMLDW AGTMVDFGCF APLNVFVEVF ARKGVQVTVE EARQPMGMLK RDHIAAMCQM 

        70         80         90        100        110        120 
ERIAGVWEGL YGRKPGEADI DELYADFEPL LFSTLKDYAK PVPGAVELAD RLRSQGIAIG 

       130        140        150        160        170        180 
STTGYTRAMM DVVCKGAKEQ GYEPDTLVTP TEVSAGRPYP WMIYRNAEML GVYPMHHIVK 

       190        200        210        220        230        240 
AGDTVSDMLE GVNAGCWTVG VIVGSSELGM TEEEVNGCED AELSERKAAV AARLQAAGAH 

       250        260 
YVIDRIGQLD SLIAQINARM ERGERP

« Hide

References

[1]"Complete genome sequence of Paenibacillus sp. strain JDR-2."
Chow V., Nong G., St John F.J., Rice J.D., Dickstein E., Chertkov O., Bruce D., Detter C., Brettin T., Han J., Woyke T., Pitluck S., Nolan M., Pati A., Martin J., Copeland A., Land M.L., Goodwin L. expand/collapse author list , Jones J.B., Ingram L.O., Shanmugam K.T., Preston J.F.
Stand. Genomic Sci. 6:1-10(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JDR-2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001656 Genomic DNA. Translation: ACT02972.1.
RefSeqYP_003013058.1. NC_012914.1.

3D structure databases

ProteinModelPortalC6D7U2.
SMRC6D7U2. Positions 3-257.
ModBaseSearch...

Protein-protein interaction databases

STRING324057.Pjdr2_4351.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT02972; ACT02972; Pjdr2_4351.
GeneID8129082.
KEGGpjd:Pjdr2_4351.
PATRIC22839259. VBIPaeSp118865_4337.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0637.
HOGENOMHOG000217971.
KOK05306.
OMAEFGATWE.
ProtClustDBPRK13478.

Enzyme and pathway databases

BioCycPSP324057:GH5H-4449-MONOMER.

Family and domain databases

Gene3D1.10.150.240. 1 hit.
3.40.50.1000. 2 hits.
HAMAPMF_01375. PhnX.
InterProIPR023214. HAD-like_dom.
IPR023198. PGP_dom2.
IPR006323. Phosphonoacetald_hydro.
[Graphical view]
PfamPF13419. HAD_2. 1 hit.
[Graphical view]
SUPFAMSSF56784. HAD-like_dom. 1 hit.
TIGRFAMsTIGR01422. phosphonatase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6D7U2_PAESJ
AccessionPrimary (citable) accession number: C6D7U2
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 1, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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