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C6D4F9 (C6D4F9_PAESJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.3.2.5 EMBL ACT02387.1
Gene names
Ordered Locus Names:Pjdr2_3757 EMBL ACT02387.1
OrganismPaenibacillus sp. (strain JDR-2) [Complete proteome] [HAMAP] EMBL ACT02387.1
Taxonomic identifier324057 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

Protein attributes

Sequence length411 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C6D4F9 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: C22358B80D7CC144

FASTA41143,755
        10         20         30         40         50         60 
MLRGKTIVLG ITGGIAAYKG AALCSKLVQA GAEVHVIMTE SATKFITPLT LQTLSRHPVH 

        70         80         90        100        110        120 
IDTFDEKDPS VVTHIDLADR ADLVVIAPAT ANIIGKVANG LADDMLSTTL LAATSPVLVA 

       130        140        150        160        170        180 
PAMNVHMYEH PAVVRNLELL ASRGVMFVEP GTGQLACGYV AKGRLAEPED IVIAVHSLLK 

       190        200        210        220        230        240 
AKEHGTLAGK RVLVTAGGTM ERLDPVRYLT NDSSGKMGFA IAEAAKVMGA EVTVIAGRTS 

       250        260        270        280        290        300 
VDPPAGVKVI RVESARQMLD AVLERFEESD IVVKSAAVAD YRPVTRHGQK IKKSGETLTL 

       310        320        330        340        350        360 
ELEKTTDILQ TLGERKTHQL LIGFAAETEQ LEKYAMDKLK RKNADLIVGN DVSQEGAGFN 

       370        380        390        400        410 
GDTNIVQLYG PSGLIEAMPL LSKRETAQRI LTIAARRLSE GAAQSGGRGE E 

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References

[1]"Complete genome sequence of Paenibacillus sp. strain JDR-2."
Chow V., Nong G., St John F.J., Rice J.D., Dickstein E., Chertkov O., Bruce D., Detter C., Brettin T., Han J., Woyke T., Pitluck S., Nolan M., Pati A., Martin J., Copeland A., Land M.L., Goodwin L. expand/collapse author list , Jones J.B., Ingram L.O., Shanmugam K.T., Preston J.F.
Stand. Genomic Sci. 6:1-10(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JDR-2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001656 Genomic DNA. Translation: ACT02387.1.
RefSeqYP_003012473.1. NC_012914.1.

3D structure databases

ProteinModelPortalC6D4F9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING324057.Pjdr2_3757.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT02387; ACT02387; Pjdr2_3757.
GeneID8123849.
KEGGpjd:Pjdr2_3757.
PATRIC22838041. VBIPaeSp118865_3738.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0452.
HOGENOMHOG000037525.
KOK13038.
OMAQNALLAC.
OrthoDBEOG6FFSBB.

Enzyme and pathway databases

BioCycPSP324057:GH5H-3846-MONOMER.

Family and domain databases

Gene3D3.40.50.10300. 1 hit.
3.40.50.1950. 1 hit.
InterProIPR005252. CoaBC.
IPR007085. DNA/pantothenate-metab_flavo_C.
IPR003382. Flavoprotein.
[Graphical view]
PfamPF04127. DFP. 1 hit.
PF02441. Flavoprotein. 1 hit.
[Graphical view]
SUPFAMSSF102645. SSF102645. 1 hit.
SSF52507. SSF52507. 1 hit.
TIGRFAMsTIGR00521. coaBC_dfp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6D4F9_PAESJ
AccessionPrimary (citable) accession number: C6D4F9
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)