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C6D1Z2 (C6D1Z2_PAESJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.51 EMBL ACT03846.1
Gene names
Ordered Locus Names:Pjdr2_5235 EMBL ACT03846.1
OrganismPaenibacillus sp. (strain JDR-2) [Complete proteome] [HAMAP] EMBL ACT03846.1
Taxonomic identifier324057 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

Protein attributes

Sequence length414 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ACT03846.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processfucose metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-L-fucosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6D1Z2 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 614E61523C33A4CD

FASTA41447,056
        10         20         30         40         50         60 
MHSSLNRPLP TEHQLLWQDF ELGFFCHFGM NTFCDQEWGD GNDSPRLFHP AELDARQWVR 

        70         80         90        100        110        120 
TAKRAGFRYF VLTAKHHDGF CLWPTLTTDY SVASSPWKEG HGDVVKECAE ACREEGIGFG 

       130        140        150        160        170        180 
LYLSPWDRHE PCYSDKAAYD DFYLRQLEEL ITGYGPLVEI WFDGAGSEGR EYDWSRIMSL 

       190        200        210        220        230        240 
VKQHQPGAMI FNMGAPTIRW VGNEDGVAPY PSWNTAESAR VSMFSDASLN WLPETPSWVP 

       250        260        270        280        290        300 
AECDVPIRKD RWFWHPDEEG LLLSLDSLMD IYYRSVGHGA TLLLNVAPDN RGLLPDADVE 

       310        320        330        340        350        360 
RVIAFGDEIS RRLGKALAQT VDQEGQFIIL GLEPNTVVEH VVIMEDIRYG ECVRAYAIEA 

       370        380        390        400        410 
WCSGEWQEIV RGSAIGHKKI DRIAPASIDG LRLRILESDD KPRIRSFTAY GSNE 

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References

[1]"Complete genome sequence of Paenibacillus sp. strain JDR-2."
Chow V., Nong G., St John F.J., Rice J.D., Dickstein E., Chertkov O., Bruce D., Detter C., Brettin T., Han J., Woyke T., Pitluck S., Nolan M., Pati A., Martin J., Copeland A., Land M.L., Goodwin L. expand/collapse author list , Jones J.B., Ingram L.O., Shanmugam K.T., Preston J.F.
Stand. Genomic Sci. 6:1-10(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JDR-2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001656 Genomic DNA. Translation: ACT03846.1.
RefSeqYP_003013932.1. NC_012914.1.

3D structure databases

ProteinModelPortalC6D1Z2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING324057.Pjdr2_5235.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT03846; ACT03846; Pjdr2_5235.
GeneID8127782.
KEGGpjd:Pjdr2_5235.
PATRIC22840957. VBIPaeSp118865_5180.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3669.
HOGENOMHOG000221495.
KOK01206.
OMAREEGIGF.
OrthoDBEOG61ZTBG.

Enzyme and pathway databases

BioCycPSP324057:GH5H-5338-MONOMER.

Family and domain databases

Gene3D2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProIPR016286. FUC_metazoa-typ.
IPR008979. Galactose-bd-like.
IPR000933. Glyco_hydro_29.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10030. PTHR10030. 1 hit.
PfamPF01120. Alpha_L_fucos. 1 hit.
[Graphical view]
PRINTSPR00741. GLHYDRLASE29.
SMARTSM00812. Alpha_L_fucos. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6D1Z2_PAESJ
AccessionPrimary (citable) accession number: C6D1Z2
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)