C6D0J7 (C6D0J7_PAESJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase LigD, polymerase domain protein EMBL ACT03596.1

Gene names

Ordered Locus Names:

Pjdr2_4985

Organism

Paenibacillus sp. (strain JDR-2) [Complete proteome] [HAMAP] EMBL ACT03596.1

Taxonomic identifier

324057 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Paenibacillaceae › Paenibacillus

Protein attributes

Sequence length	304 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	C6D0J7 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 30FCF998564124BE	FASTA	304	34,516
	10 20 30 40 50 60 MNKTSASAKR PAMVMVEGQE ITVTNPEKPL WPEHGITKLM YLEKLAMLSP FLLKHCKDRY 70 80 90 100 110 120 LTTIRYPHGY AGKSFYQKNC PEPKPEFVHI SESEGISYIQ LDNLPTLLWL GNLACLEFHA 130 140 150 160 170 180 SFDRISNPDR PTEWILDLDP SREEEPRIIE AAALVGKLLE SLKIKSVPKT SGATGVQIVV 190 200 210 220 230 240 PLQQKYTFDE LRGLGQFVGD YLSSAYPQLF TVERLTKNRG DLIYVDYLQH YRGKTISAPY 250 260 270 280 290 300 TPRARYGAPV STPLKWEEVY AGGIKPADFH LLNIGERLQR FGDLIDLEKP QDLGHVLSFI HAKK

References

[1]

"Complete genome sequence of Paenibacillus sp. strain JDR-2." Chow V., Nong G., St John F.J., Rice J.D., Dickstein E., Chertkov O., Bruce D., Detter C., Brettin T., Han J., Woyke T., Pitluck S., Nolan M., Pati A., Martin J., Copeland A., Land M.L., Goodwin L. , Jones J.B., Ingram L.O., Shanmugam K.T., Preston J.F. Stand. Genomic Sci. 6:1-10(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JDR-2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001656 Genomic DNA. Translation: ACT03596.1.
RefSeq	YP_003013682.1. NC_012914.1.
3D structure databases
ProteinModelPortal	C6D0J7.
ModBase	Search...
Protein-protein interaction databases
STRING	324057.Pjdr2_4985.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACT03596; ACT03596; Pjdr2_4985.
GeneID	8127528.
KEGG	pjd:Pjdr2_4985.
PATRIC	22840459. VBIPaeSp118865_4931.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3285.
HOGENOM	HOG000244654.
KO	K01971.
OMA	WEELANI.
ProtClustDB	CLSK2482184.
Enzyme and pathway databases
BioCyc	PSP324057:GH5H-5088-MONOMER.
Family and domain databases
InterPro	IPR014145. LigD_pol. [Graphical view]
TIGRFAMs	TIGR02778. ligD_pol. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C6D0J7_PAESJ

Accession

Primary (citable) accession number: C6D0J7

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)