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C6D0J7 (C6D0J7_PAESJ) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Pjdr2_4985 EMBL ACT03596.1
OrganismPaenibacillus sp. (strain JDR-2) [Complete proteome] [HAMAP] EMBL ACT03596.1
Taxonomic identifier324057 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

Protein attributes

Sequence length304 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
C6D0J7 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 30FCF998564124BE

FASTA30434,516
        10         20         30         40         50         60 
MNKTSASAKR PAMVMVEGQE ITVTNPEKPL WPEHGITKLM YLEKLAMLSP FLLKHCKDRY 

        70         80         90        100        110        120 
LTTIRYPHGY AGKSFYQKNC PEPKPEFVHI SESEGISYIQ LDNLPTLLWL GNLACLEFHA 

       130        140        150        160        170        180 
SFDRISNPDR PTEWILDLDP SREEEPRIIE AAALVGKLLE SLKIKSVPKT SGATGVQIVV 

       190        200        210        220        230        240 
PLQQKYTFDE LRGLGQFVGD YLSSAYPQLF TVERLTKNRG DLIYVDYLQH YRGKTISAPY 

       250        260        270        280        290        300 
TPRARYGAPV STPLKWEEVY AGGIKPADFH LLNIGERLQR FGDLIDLEKP QDLGHVLSFI 


HAKK 

« Hide

References

[1]"Complete genome sequence of Paenibacillus sp. strain JDR-2."
Chow V., Nong G., St John F.J., Rice J.D., Dickstein E., Chertkov O., Bruce D., Detter C., Brettin T., Han J., Woyke T., Pitluck S., Nolan M., Pati A., Martin J., Copeland A., Land M.L., Goodwin L. expand/collapse author list , Jones J.B., Ingram L.O., Shanmugam K.T., Preston J.F.
Stand. Genomic Sci. 6:1-10(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JDR-2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001656 Genomic DNA. Translation: ACT03596.1.
RefSeqYP_003013682.1. NC_012914.1.

3D structure databases

ProteinModelPortalC6D0J7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING324057.Pjdr2_4985.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT03596; ACT03596; Pjdr2_4985.
GeneID8127528.
KEGGpjd:Pjdr2_4985.
PATRIC22840459. VBIPaeSp118865_4931.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000244654.
KOK01971.
OMAKPLWPEA.
OrthoDBEOG661H49.
ProtClustDBCLSK2482184.

Enzyme and pathway databases

BioCycPSP324057:GH5H-5088-MONOMER.

Family and domain databases

InterProIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6D0J7_PAESJ
AccessionPrimary (citable) accession number: C6D0J7
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: November 13, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)