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C6D0J7

- C6D0J7_PAESJ

UniProt

C6D0J7 - C6D0J7_PAESJ

Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Pjdr2_4985

Organism
Paenibacillus sp. (strain JDR-2)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciPSP324057:GH5H-5088-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, polymerase domain proteinImported
    Gene namesi
    Ordered Locus Names:Pjdr2_4985Imported
    OrganismiPaenibacillus sp. (strain JDR-2)Imported
    Taxonomic identifieri324057 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
    ProteomesiUP000002510: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi324057.Pjdr2_4985.

    Structurei

    3D structure databases

    ProteinModelPortaliC6D0J7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000244654.
    KOiK01971.
    OMAiKPLWPEA.
    OrthoDBiEOG661H49.

    Family and domain databases

    InterProiIPR014145. LigD_pol.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6D0J7-1 [UniParc]FASTAAdd to Basket

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    MNKTSASAKR PAMVMVEGQE ITVTNPEKPL WPEHGITKLM YLEKLAMLSP    50
    FLLKHCKDRY LTTIRYPHGY AGKSFYQKNC PEPKPEFVHI SESEGISYIQ 100
    LDNLPTLLWL GNLACLEFHA SFDRISNPDR PTEWILDLDP SREEEPRIIE 150
    AAALVGKLLE SLKIKSVPKT SGATGVQIVV PLQQKYTFDE LRGLGQFVGD 200
    YLSSAYPQLF TVERLTKNRG DLIYVDYLQH YRGKTISAPY TPRARYGAPV 250
    STPLKWEEVY AGGIKPADFH LLNIGERLQR FGDLIDLEKP QDLGHVLSFI 300
    HAKK 304
    Length:304
    Mass (Da):34,516
    Last modified:September 1, 2009 - v1
    Checksum:i30FCF998564124BE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001656 Genomic DNA. Translation: ACT03596.1.
    RefSeqiWP_015846534.1. NC_012914.1.
    YP_003013682.1. NC_012914.1.

    Genome annotation databases

    EnsemblBacteriaiACT03596; ACT03596; Pjdr2_4985.
    GeneIDi8127528.
    KEGGipjd:Pjdr2_4985.
    PATRICi22840459. VBIPaeSp118865_4931.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001656 Genomic DNA. Translation: ACT03596.1 .
    RefSeqi WP_015846534.1. NC_012914.1.
    YP_003013682.1. NC_012914.1.

    3D structure databases

    ProteinModelPortali C6D0J7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 324057.Pjdr2_4985.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT03596 ; ACT03596 ; Pjdr2_4985 .
    GeneIDi 8127528.
    KEGGi pjd:Pjdr2_4985.
    PATRICi 22840459. VBIPaeSp118865_4931.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000244654.
    KOi K01971.
    OMAi KPLWPEA.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci PSP324057:GH5H-5088-MONOMER.

    Family and domain databases

    InterProi IPR014145. LigD_pol.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JDR-2Imported.

    Entry informationi

    Entry nameiC6D0J7_PAESJ
    AccessioniPrimary (citable) accession number: C6D0J7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3