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C6D0J7

- C6D0J7_PAESJ

UniProt

C6D0J7 - C6D0J7_PAESJ

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Protein
Submitted name: DNA polymerase LigD, polymerase domain protein
Gene
Pjdr2_4985
Organism
Paenibacillus sp. (strain JDR-2)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciPSP324057:GH5H-5088-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Pjdr2_4985Imported
OrganismiPaenibacillus sp. (strain JDR-2)Imported
Taxonomic identifieri324057 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000002510: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi324057.Pjdr2_4985.

Structurei

3D structure databases

ProteinModelPortaliC6D0J7.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
KOiK01971.
OMAiKPLWPEA.
OrthoDBiEOG661H49.

Family and domain databases

InterProiIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

C6D0J7-1 [UniParc]FASTAAdd to Basket

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MNKTSASAKR PAMVMVEGQE ITVTNPEKPL WPEHGITKLM YLEKLAMLSP    50
FLLKHCKDRY LTTIRYPHGY AGKSFYQKNC PEPKPEFVHI SESEGISYIQ 100
LDNLPTLLWL GNLACLEFHA SFDRISNPDR PTEWILDLDP SREEEPRIIE 150
AAALVGKLLE SLKIKSVPKT SGATGVQIVV PLQQKYTFDE LRGLGQFVGD 200
YLSSAYPQLF TVERLTKNRG DLIYVDYLQH YRGKTISAPY TPRARYGAPV 250
STPLKWEEVY AGGIKPADFH LLNIGERLQR FGDLIDLEKP QDLGHVLSFI 300
HAKK 304
Length:304
Mass (Da):34,516
Last modified:September 1, 2009 - v1
Checksum:i30FCF998564124BE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001656 Genomic DNA. Translation: ACT03596.1.
RefSeqiWP_015846534.1. NC_012914.1.
YP_003013682.1. NC_012914.1.

Genome annotation databases

EnsemblBacteriaiACT03596; ACT03596; Pjdr2_4985.
GeneIDi8127528.
KEGGipjd:Pjdr2_4985.
PATRICi22840459. VBIPaeSp118865_4931.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001656 Genomic DNA. Translation: ACT03596.1 .
RefSeqi WP_015846534.1. NC_012914.1.
YP_003013682.1. NC_012914.1.

3D structure databases

ProteinModelPortali C6D0J7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 324057.Pjdr2_4985.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT03596 ; ACT03596 ; Pjdr2_4985 .
GeneIDi 8127528.
KEGGi pjd:Pjdr2_4985.
PATRICi 22840459. VBIPaeSp118865_4931.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000244654.
KOi K01971.
OMAi KPLWPEA.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci PSP324057:GH5H-5088-MONOMER.

Family and domain databases

InterProi IPR014145. LigD_pol.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JDR-2.

Entry informationi

Entry nameiC6D0J7_PAESJ
AccessioniPrimary (citable) accession number: C6D0J7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: September 3, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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