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Protein
Submitted name:

Short-chain dehydrogenase/reductase SDR

Gene

Pjdr2_4855

Organism
Paenibacillus sp. (strain JDR-2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. oxidoreductase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciPSP324057:GH5H-4953-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Short-chain dehydrogenase/reductase SDRImported
Gene namesi
Ordered Locus Names:Pjdr2_4855Imported
OrganismiPaenibacillus sp. (strain JDR-2)Imported
Taxonomic identifieri324057 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000002510 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi324057.Pjdr2_4855.

Structurei

3D structure databases

ProteinModelPortaliC6CZU4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the short-chain dehydrogenases/reductases (SDR) family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1028.
KOiK00059.
OMAiMVCPGNI.
OrthoDBiEOG6N3CR8.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR002198. DH_sc/Rdtase_SDR.
IPR002347. Glc/ribitol_DH.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.

Sequencei

Sequence statusi: Complete.

C6CZU4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELMGRTALV TGSAKGLGKR TALQLASLGC SIVLNYLESR QEALELQREI
60 70 80 90 100
EQLGVKAIAI QGDISVPAGV AQLAAEAEAW NGGIDILVNN AGPFIRERRL
110 120 130 140 150
FADYNEDAII QLLNGNLLGV MLLDHKLLPG MRKRGWGRII HLGFGHADEA
160 170 180 190 200
RAWPHRAVYA AAKTGLVSFT KSLAVEEAPS GITVNMIAPG DIRGLNKERT
210 220 230 240 250
IDEATCERDL ESPVGRPGTG EDIARVIGFL CQSRSDYLTG SFINVTGGFD

AIRSNIIGL
Length:259
Mass (Da):27,818
Last modified:August 31, 2009 - v1
Checksum:iD98B50D350DA8C99
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001656 Genomic DNA. Translation: ACT03467.1.
RefSeqiWP_015846405.1. NC_012914.1.
YP_003013553.1. NC_012914.1.

Genome annotation databases

EnsemblBacteriaiACT03467; ACT03467; Pjdr2_4855.
KEGGipjd:Pjdr2_4855.
PATRICi22840215. VBIPaeSp118865_4814.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001656 Genomic DNA. Translation: ACT03467.1.
RefSeqiWP_015846405.1. NC_012914.1.
YP_003013553.1. NC_012914.1.

3D structure databases

ProteinModelPortaliC6CZU4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi324057.Pjdr2_4855.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACT03467; ACT03467; Pjdr2_4855.
KEGGipjd:Pjdr2_4855.
PATRICi22840215. VBIPaeSp118865_4814.

Phylogenomic databases

eggNOGiCOG1028.
KOiK00059.
OMAiMVCPGNI.
OrthoDBiEOG6N3CR8.

Enzyme and pathway databases

BioCyciPSP324057:GH5H-4953-MONOMER.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR002198. DH_sc/Rdtase_SDR.
IPR002347. Glc/ribitol_DH.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JDR-2Imported.

Entry informationi

Entry nameiC6CZU4_PAESJ
AccessioniPrimary (citable) accession number: C6CZU4
Entry historyi
Integrated into UniProtKB/TrEMBL: August 31, 2009
Last sequence update: August 31, 2009
Last modified: March 31, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.