C6CZU4 (C6CZU4_PAESJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Short-chain dehydrogenase/reductase SDR EMBL ACT03467.1

Gene names

Ordered Locus Names:

Pjdr2_4855

Organism

Paenibacillus sp. (strain JDR-2) [Complete proteome] [HAMAP] EMBL ACT03467.1

Taxonomic identifier

324057 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Paenibacillaceae › Paenibacillus

Protein attributes

Sequence length	259 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the short-chain dehydrogenases/reductases (SDR) family. RuleBase RU000363

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	oxidation-reduction process Inferred from electronic annotation. Source: GOC
Molecular_function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6CZU4 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: D98B50D350DA8C99	FASTA	259	27,818
	10 20 30 40 50 60 MELMGRTALV TGSAKGLGKR TALQLASLGC SIVLNYLESR QEALELQREI EQLGVKAIAI 70 80 90 100 110 120 QGDISVPAGV AQLAAEAEAW NGGIDILVNN AGPFIRERRL FADYNEDAII QLLNGNLLGV 130 140 150 160 170 180 MLLDHKLLPG MRKRGWGRII HLGFGHADEA RAWPHRAVYA AAKTGLVSFT KSLAVEEAPS 190 200 210 220 230 240 GITVNMIAPG DIRGLNKERT IDEATCERDL ESPVGRPGTG EDIARVIGFL CQSRSDYLTG 250 SFINVTGGFD AIRSNIIGL

References

[1]

"Complete genome sequence of Paenibacillus sp. strain JDR-2." Chow V., Nong G., St John F.J., Rice J.D., Dickstein E., Chertkov O., Bruce D., Detter C., Brettin T., Han J., Woyke T., Pitluck S., Nolan M., Pati A., Martin J., Copeland A., Land M.L., Goodwin L. , Jones J.B., Ingram L.O., Shanmugam K.T., Preston J.F. Stand. Genomic Sci. 6:1-10(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JDR-2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001656 Genomic DNA. Translation: ACT03467.1.
RefSeq	YP_003013553.1. NC_012914.1.
3D structure databases
ProteinModelPortal	C6CZU4.
ModBase	Search...
Protein-protein interaction databases
STRING	324057.Pjdr2_4855.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACT03467; ACT03467; Pjdr2_4855.
GeneID	8127393.
KEGG	pjd:Pjdr2_4855.
PATRIC	22840215. VBIPaeSp118865_4814.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1028.
KO	K00059.
ProtClustDB	PRK12825.
Enzyme and pathway databases
BioCyc	PSP324057:GH5H-4953-MONOMER.
Family and domain databases
Gene3D	3.40.50.720. 1 hit.
InterPro	IPR002198. DH_sc/Rdtase_SDR. IPR002347. Glc/ribitol_DH. IPR016040. NAD(P)-bd_dom. [Graphical view]
Pfam	PF00106. adh_short. 1 hit. [Graphical view]
PRINTS	PR00081. GDHRDH. PR00080. SDRFAMILY.
ProtoNet	Search...

Entry information

Entry name

C6CZU4_PAESJ

Accession

Primary (citable) accession number: C6CZU4

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)