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Protein
Submitted name:

Alpha-L-rhamnosidase

Gene

Pjdr2_1481

Organism
Paenibacillus sp. (strain JDR-2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciPSP324057:GH5H-1561-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-L-rhamnosidaseImported
Gene namesi
Ordered Locus Names:Pjdr2_1481Imported
OrganismiPaenibacillus sp. (strain JDR-2)Imported
Taxonomic identifieri324057 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
Proteomesi
  • UP000002510 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi324057.Pjdr2_1481.

Structurei

3D structure databases

ProteinModelPortaliC6CWU2.
SMRiC6CWU2. Positions 7-951.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini39 – 181143Bac_rhamnosid_NInterPro annotationAdd
BLAST
Domaini434 – 939506Bac_rhamnosidInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105DN8. Bacteria.
ENOG410XNWE. LUCA.
HOGENOMiHOG000049584.
OMAiTRSHCHA.
OrthoDBiEOG6M9DRM.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR008902. Bac_rhamnosid.
IPR013737. Bac_rhamnosid_N.
IPR008979. Galactose-bd-like.
[Graphical view]
PfamiPF05592. Bac_rhamnosid. 1 hit.
PF08531. Bac_rhamnosid_N. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
SSF49785. SSF49785. 1 hit.

Sequencei

Sequence statusi: Complete.

C6CWU2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMKETAWKAQ WIWGGEEESP RNEWRCFRST FDVTTAGAAD AKLRISADSR
60 70 80 90 100
YVAYVNGVQI GRGPVRSWPE EQFYDTYSIG HLLQPGDRNT IAVLVLHFGV
110 120 130 140 150
TNFYYLRGKG GLLAEIASGD EVLAATDSSW KTEKLRGHHS AAPRMSCQQG
160 170 180 190 200
FAEIYDARES DGDWTGTTFV DSSWAQAAVA AEVGEGPWKK LIPRDIPFLT
210 220 230 240 250
EEKLYPSRIE SLQRVKPPAW TAAIDLRNAM VPGSVEHANP IQYMGYIATT
260 270 280 290 300
ISLAEAGKAT VGILQSRGEK LWIDGQRIEN SHGNDPERYY EVELVAGEHF
310 320 330 340 350
LLLDITQGDH GGAYHVAIHS EQKFSLHSPD SAGETPWLLI GPFDDTEYID
360 370 380 390 400
TRENRQIDRN EPNYIRAAGA ASMEELAAVR SWIRPLDGIY YTEQDVFGSN
410 420 430 440 450
VWRPEAEPYA LPSGLNACLT AAREYAVIPR FRDGDTELVI DLGKQRTGFF
460 470 480 490 500
GFKIEAPAGT VVDVYGLEYL KADFRQHTFG LDNTFRYVCL EGRQQYESPV
510 520 530 540 550
RRGFRYAVLT IRGAAGPVKL HEVYMVQSTY PVAEAGTFHS SDPLLNDIWA
560 570 580 590 600
ISQHTTRNCM EDTFVDCPSY EQTYWVGDSR NEALVNYYVF GELDIVKRCL
610 620 630 640 650
RLVPGSKDRS PLYMDQVPSG WTSVIPNWTF FWVLATMEYV EHTADKAFAA
660 670 680 690 700
EMWPEVRFTL EHYLTHINAQ GLLEMRGWNL LDWAPIDQPN EGVVTHQNLF
710 720 730 740 750
LTKTLRQAVQ MSAEAGKADE GASFAEAAVS LEQAINDHLW DEERGAYLDC
760 770 780 790 800
IHADGRRSEI YSMQTQVVAL LCDIAQEERR AKLESYLLQP PASFVQIGSP
810 820 830 840 850
FMSFFYYEAL ESMRHIPAML DDIRRNYGLM IANDATTCWE MYPNFTENRA
860 870 880 890 900
NADLLTRSHC HAWSAGPAYF LGRNVLGIKR LDSGWSKVRI EPSPCDLKWA
910 920 930 940 950
RGAVPLPNGG TIEVDWSIAD EVMSLRILAP EDVELDVRLP EALTGNVSIV

RTKKLPL
Length:957
Mass (Da):107,792
Last modified:September 1, 2009 - v1
Checksum:i6899E1A3CC6FB1CE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001656 Genomic DNA. Translation: ACT00156.1.
RefSeqiWP_015843101.1. NC_012914.1.

Genome annotation databases

EnsemblBacteriaiACT00156; ACT00156; Pjdr2_1481.
KEGGipjd:Pjdr2_1481.
PATRICi22833517. VBIPaeSp118865_1485.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001656 Genomic DNA. Translation: ACT00156.1.
RefSeqiWP_015843101.1. NC_012914.1.

3D structure databases

ProteinModelPortaliC6CWU2.
SMRiC6CWU2. Positions 7-951.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi324057.Pjdr2_1481.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACT00156; ACT00156; Pjdr2_1481.
KEGGipjd:Pjdr2_1481.
PATRICi22833517. VBIPaeSp118865_1485.

Phylogenomic databases

eggNOGiENOG4105DN8. Bacteria.
ENOG410XNWE. LUCA.
HOGENOMiHOG000049584.
OMAiTRSHCHA.
OrthoDBiEOG6M9DRM.

Enzyme and pathway databases

BioCyciPSP324057:GH5H-1561-MONOMER.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR008902. Bac_rhamnosid.
IPR013737. Bac_rhamnosid_N.
IPR008979. Galactose-bd-like.
[Graphical view]
PfamiPF05592. Bac_rhamnosid. 1 hit.
PF08531. Bac_rhamnosid_N. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
SSF49785. SSF49785. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JDR-2Imported.

Entry informationi

Entry nameiC6CWU2_PAESJ
AccessioniPrimary (citable) accession number: C6CWU2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: January 20, 2016
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.