C6CWN8 (C6CWN8_PAESJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Phosphatidylserine decarboxylase proenzyme HAMAP MF_00662
EC=4.1.1.65 HAMAP MF_00662

Gene names

Name:	psd HAMAP MF_00662
Ordered Locus Names:	Pjdr2_1428

Organism

Paenibacillus sp. (strain JDR-2) [Complete proteome] [HAMAP] EMBL ACT00103.1

Taxonomic identifier

324057 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Paenibacillaceae › Paenibacillus

Protein attributes

Sequence length	262 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Phosphatidyl-L-serine = phosphatidylethanolamine + CO2. HAMAP MF_00662 SAAS SAAS003817
Cofactor	Pyruvoyl group By similarity. HAMAP MF_00662 SAAS SAAS003817
Pathway	Phospholipid metabolism; phosphatidylethanolamine biosynthesis; phosphatidylethanolamine from CDP-diacylglycerol: step 2/2. HAMAP MF_00662 SAAS SAAS003817
Sequence similarities	Belongs to the phosphatidylserine decarboxylase family. Type 1 subfamily. HAMAP MF_00662

Ontologies

Keywords
Biological process	Phospholipid biosynthesis HAMAP MF_00662 SAAS SAAS003817
Ligand	Pyruvate HAMAP MF_00662 SAAS SAAS003817
Molecular function	Decarboxylase HAMAP MF_00662 SAAS SAAS003817 Lyase
PTM	Zymogen HAMAP MF_00662
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	phospholipid biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	phosphatidylserine decarboxylase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Site	226 – 227	2	Cleavage (non-hydrolytic) By similarity HAMAP MF_00662
Amino acid modifications
	Modified residue	227	1	Pyruvic acid (Ser) By similarity HAMAP MF_00662

Sequences

	Sequence		Length	Mass (Da)
	C6CWN8 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 5A224796143127F6	FASTA	262	29,783
	10 20 30 40 50 60 MMGWLFQAMT ELSSRKWISR LTGRFAQSKA SRGWIPRFAS MYNIKIEEAE KPLEAYSTLN 70 80 90 100 110 120 EFFTRRLKPG SRIIHEEATA LISPVDALIT GAGPIKAGTI VNVKGQDYTI EELLNRSPRT 130 140 150 160 170 180 ELYRDGYYIV LYLSPTDYHR IHTPVDGQIV EREHVPGKVY PVNDFGLRRM RRVLSRNERL 190 200 210 220 230 240 ITYIKHAGGE TAVVKVGAMN VSSIRYVEPI RDKAVKGGEL AYFEFGSTVV LLMENDTFIP 250 260 RQDLAPGLKV RMGEMLGKLI EE

References

[1]

"Complete sequence of Paenibacillus sp. JDR-2." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Shanmugam K.T., Ingram L.O., Preston J. Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JDR-2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001656 Genomic DNA. Translation: ACT00103.1.
RefSeq	YP_003010189.1. NC_012914.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C6CWN8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8128086.
GenomeReviews	Gene locus Pjdr2_1428 in contig CP001656_GR.
KEGG	pjd:Pjdr2_1428.
PATRIC	22833411. VBIPaeSp118865_1432.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	SMATVWH.
ProtClustDB	CLSK2550628.
Family and domain databases
HAMAP	MF_00662. PS_decarb_type1. [Tree]
InterPro	IPR003817. PS_Dcarbxylase. IPR005221. PS_decarb. [Graphical view]
KO	K01613.
PANTHER	PTHR10067. PS_decarb. 1 hit.
Pfam	PF02666. PS_Dcarbxylase. 1 hit. [Graphical view]
TIGRFAMs	TIGR00163. PS_decarb. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C6CWN8_PAESJ

Accession

Primary (citable) accession number: C6CWN8

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)