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C6CVU1

- C6CVU1_PAESJ

UniProt

C6CVU1 - C6CVU1_PAESJ

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Pjdr2_1127

Organism
Paenibacillus sp. (strain JDR-2)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPSP324057:GH5H-1207-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Pjdr2_1127Imported
OrganismiPaenibacillus sp. (strain JDR-2)Imported
Taxonomic identifieri324057 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000002510: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi324057.Pjdr2_1127.

Structurei

3D structure databases

ProteinModelPortaliC6CVU1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000049932.
KOiK01971.
OMAiLYTRHNN.
OrthoDBiEOG6F2971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6CVU1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFISPMQPTK AEEPFNSEEF LFEPKLNGHR LIVSFINGQV KMYTRNNNEV
60 70 80 90 100
ARQYPELFNV PVDSGVDVVF DGEVVRLRED GTNDFEELIQ RYRIGKATKI
110 120 130 140 150
KDASRTHPVQ YYVFDILYLN GKSLAHLPLV KRKEILARIL KPSGYYHITM
160 170 180 190 200
SIENEGRALF KVMEDKGLEG IVAKKKNSKY VSKRSENWLK VINYQYLEVS
210 220 230 240 250
ICAYRRKEFG WLIEHEGRTV GCIEWTIPTD DRKAFYKRAQ SLVTGQDKHF
260 270 280
VYVKPILKVV VRFRDWTSNH MLRTPEYVGF SGEQISL
Length:287
Mass (Da):33,543
Last modified:September 1, 2009 - v1
Checksum:iD9F32FCFF47EBE15
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001656 Genomic DNA. Translation: ACS99805.1.
RefSeqiWP_015842752.1. NC_012914.1.
YP_003009892.1. NC_012914.1.

Genome annotation databases

EnsemblBacteriaiACS99805; ACS99805; Pjdr2_1127.
GeneIDi8124528.
KEGGipjd:Pjdr2_1127.
PATRICi22832787. VBIPaeSp118865_1120.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001656 Genomic DNA. Translation: ACS99805.1 .
RefSeqi WP_015842752.1. NC_012914.1.
YP_003009892.1. NC_012914.1.

3D structure databases

ProteinModelPortali C6CVU1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 324057.Pjdr2_1127.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACS99805 ; ACS99805 ; Pjdr2_1127 .
GeneIDi 8124528.
KEGGi pjd:Pjdr2_1127.
PATRICi 22832787. VBIPaeSp118865_1120.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000049932.
KOi K01971.
OMAi LYTRHNN.
OrthoDBi EOG6F2971.

Enzyme and pathway databases

BioCyci PSP324057:GH5H-1207-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JDR-2Imported.

Entry informationi

Entry nameiC6CVU1_PAESJ
AccessioniPrimary (citable) accession number: C6CVU1
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: October 1, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3