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C6CVU1

- C6CVU1_PAESJ

UniProt

C6CVU1 - C6CVU1_PAESJ

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Pjdr2_1127

Organism
Paenibacillus sp. (strain JDR-2)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPSP324057:GH5H-1207-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Pjdr2_1127Imported
    OrganismiPaenibacillus sp. (strain JDR-2)Imported
    Taxonomic identifieri324057 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
    ProteomesiUP000002510: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi324057.Pjdr2_1127.

    Structurei

    3D structure databases

    ProteinModelPortaliC6CVU1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000049932.
    KOiK01971.
    OMAiLYTRHNN.
    OrthoDBiEOG6F2971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C6CVU1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFISPMQPTK AEEPFNSEEF LFEPKLNGHR LIVSFINGQV KMYTRNNNEV    50
    ARQYPELFNV PVDSGVDVVF DGEVVRLRED GTNDFEELIQ RYRIGKATKI 100
    KDASRTHPVQ YYVFDILYLN GKSLAHLPLV KRKEILARIL KPSGYYHITM 150
    SIENEGRALF KVMEDKGLEG IVAKKKNSKY VSKRSENWLK VINYQYLEVS 200
    ICAYRRKEFG WLIEHEGRTV GCIEWTIPTD DRKAFYKRAQ SLVTGQDKHF 250
    VYVKPILKVV VRFRDWTSNH MLRTPEYVGF SGEQISL 287
    Length:287
    Mass (Da):33,543
    Last modified:September 1, 2009 - v1
    Checksum:iD9F32FCFF47EBE15
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001656 Genomic DNA. Translation: ACS99805.1.
    RefSeqiWP_015842752.1. NC_012914.1.
    YP_003009892.1. NC_012914.1.

    Genome annotation databases

    EnsemblBacteriaiACS99805; ACS99805; Pjdr2_1127.
    GeneIDi8124528.
    KEGGipjd:Pjdr2_1127.
    PATRICi22832787. VBIPaeSp118865_1120.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001656 Genomic DNA. Translation: ACS99805.1 .
    RefSeqi WP_015842752.1. NC_012914.1.
    YP_003009892.1. NC_012914.1.

    3D structure databases

    ProteinModelPortali C6CVU1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 324057.Pjdr2_1127.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACS99805 ; ACS99805 ; Pjdr2_1127 .
    GeneIDi 8124528.
    KEGGi pjd:Pjdr2_1127.
    PATRICi 22832787. VBIPaeSp118865_1120.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000049932.
    KOi K01971.
    OMAi LYTRHNN.
    OrthoDBi EOG6F2971.

    Enzyme and pathway databases

    BioCyci PSP324057:GH5H-1207-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JDR-2Imported.

    Entry informationi

    Entry nameiC6CVU1_PAESJ
    AccessioniPrimary (citable) accession number: C6CVU1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3