C6CVU1 (C6CVU1_PAESJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ACS99805.1

Gene names

Ordered Locus Names:

Pjdr2_1127

Organism

Paenibacillus sp. (strain JDR-2) [Complete proteome] [HAMAP] EMBL ACS99805.1

Taxonomic identifier

324057 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Paenibacillaceae › Paenibacillus

Protein attributes

Sequence length	287 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACS99805.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6CVU1 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: D9F32FCFF47EBE15	FASTA	287	33,543
	10 20 30 40 50 60 MFISPMQPTK AEEPFNSEEF LFEPKLNGHR LIVSFINGQV KMYTRNNNEV ARQYPELFNV 70 80 90 100 110 120 PVDSGVDVVF DGEVVRLRED GTNDFEELIQ RYRIGKATKI KDASRTHPVQ YYVFDILYLN 130 140 150 160 170 180 GKSLAHLPLV KRKEILARIL KPSGYYHITM SIENEGRALF KVMEDKGLEG IVAKKKNSKY 190 200 210 220 230 240 VSKRSENWLK VINYQYLEVS ICAYRRKEFG WLIEHEGRTV GCIEWTIPTD DRKAFYKRAQ 250 260 270 280 SLVTGQDKHF VYVKPILKVV VRFRDWTSNH MLRTPEYVGF SGEQISL

References

[1]

"Complete genome sequence of Paenibacillus sp. strain JDR-2." Chow V., Nong G., St John F.J., Rice J.D., Dickstein E., Chertkov O., Bruce D., Detter C., Brettin T., Han J., Woyke T., Pitluck S., Nolan M., Pati A., Martin J., Copeland A., Land M.L., Goodwin L. , Jones J.B., Ingram L.O., Shanmugam K.T., Preston J.F. Stand. Genomic Sci. 6:1-10(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JDR-2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001656 Genomic DNA. Translation: ACS99805.1.
RefSeq	YP_003009892.1. NC_012914.1.
3D structure databases
ProteinModelPortal	C6CVU1.
ModBase	Search...
Protein-protein interaction databases
STRING	324057.Pjdr2_1127.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACS99805; ACS99805; Pjdr2_1127.
GeneID	8124528.
KEGG	pjd:Pjdr2_1127.
PATRIC	22832787. VBIPaeSp118865_1120.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000049932.
KO	K01971.
OMA	IKCIQSD.
ProtClustDB	PRK07636.
Enzyme and pathway databases
BioCyc	PSP324057:GH5H-1207-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C6CVU1_PAESJ

Accession

Primary (citable) accession number: C6CVU1

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)