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C6CSZ8

- C6CSZ8_PAESJ

UniProt

C6CSZ8 - C6CSZ8_PAESJ

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Protein

DNA polymerase III subunit beta

Gene
Pjdr2_0002
Organism
Paenibacillus sp. (strain JDR-2)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA By similarity.UniRule annotation

Catalytic activityi

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).UniRule annotationSAAS annotations

GO - Molecular functioni

  1. 3'-5' exonuclease activity Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA-directed DNA polymerase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

DNA-directed DNA polymeraseUniRule annotationSAAS annotations, Nucleotidyltransferase, Transferase

Keywords - Biological processi

DNA replicationUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciPSP324057:GH5H-2-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
DNA polymerase III subunit betaUniRule annotation (EC:2.7.7.7UniRule annotation)
Gene namesi
Ordered Locus Names:Pjdr2_0002Imported
OrganismiPaenibacillus sp. (strain JDR-2)Imported
Taxonomic identifieri324057 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000002510: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
  2. DNA polymerase III complex Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Protein-protein interaction databases

STRINGi324057.Pjdr2_0002.

Structurei

3D structure databases

ProteinModelPortaliC6CSZ8.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0592.
HOGENOMiHOG000071792.
KOiK02338.
OMAiSHEGRNN.
OrthoDBiEOG65J53F.

Family and domain databases

InterProiIPR001001. DNA_polIII_beta.
IPR022635. DNA_polIII_beta_C.
IPR022637. DNA_polIII_beta_cen.
IPR022634. DNA_polIII_beta_N.
[Graphical view]
PfamiPF00712. DNA_pol3_beta. 1 hit.
PF02767. DNA_pol3_beta_2. 1 hit.
PF02768. DNA_pol3_beta_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000804. DNA_pol_III_b. 1 hit.
SMARTiSM00480. POL3Bc. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00663. dnan. 1 hit.

Sequencei

Sequence statusi: Complete.

C6CSZ8-1 [UniParc]FASTAAdd to Basket

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MKLSISKHEL NEAIQQVAKA ASSRPTIPIL GGIKIEVTHQ GVTLTASDTD    50
ISIQSFIPVE RDDLVIANVD KPGNVVLPAK FFVEIVKKLP SDNVEIEVGA 100
HFQTLIRSGS TDIQMVGLDP EEFPVLPSIE QNELFQMPGD LLKAMIRQTV 150
LAASVNEQTP ILTGVLWSLQ DKQLKFVATD RHRLASRIAQ AETAADYRFN 200
NVVIAAKTLV ELSKLVPDQH GLVDIVVADN QVLFKIGNVL FYTRVLDGTY 250
PDTSKIIPSV FKTELVLDTK KLTDAIDRAY LMSREEKTNI VRLATMEDGS 300
IEISSSSTEL GRVTEQLEPK QFDGEPLKIA FNSKYMLDVL KVIDSEHIFI 350
GFTGAMSPIV IRPTDHSYNT YVILPYRTTN 380
Length:380
Mass (Da):42,147
Last modified:September 1, 2009 - v1
Checksum:i80AA5D725055C77C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001656 Genomic DNA. Translation: ACS98682.1.
RefSeqiWP_012772004.1. NC_012914.1.
YP_003008769.1. NC_012914.1.

Genome annotation databases

EnsemblBacteriaiACS98682; ACS98682; Pjdr2_0002.
GeneIDi8126975.
KEGGipjd:Pjdr2_0002.
PATRICi22830395. VBIPaeSp118865_0002.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001656 Genomic DNA. Translation: ACS98682.1 .
RefSeqi WP_012772004.1. NC_012914.1.
YP_003008769.1. NC_012914.1.

3D structure databases

ProteinModelPortali C6CSZ8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 324057.Pjdr2_0002.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACS98682 ; ACS98682 ; Pjdr2_0002 .
GeneIDi 8126975.
KEGGi pjd:Pjdr2_0002.
PATRICi 22830395. VBIPaeSp118865_0002.

Phylogenomic databases

eggNOGi COG0592.
HOGENOMi HOG000071792.
KOi K02338.
OMAi SHEGRNN.
OrthoDBi EOG65J53F.

Enzyme and pathway databases

BioCyci PSP324057:GH5H-2-MONOMER.

Family and domain databases

InterProi IPR001001. DNA_polIII_beta.
IPR022635. DNA_polIII_beta_C.
IPR022637. DNA_polIII_beta_cen.
IPR022634. DNA_polIII_beta_N.
[Graphical view ]
Pfami PF00712. DNA_pol3_beta. 1 hit.
PF02767. DNA_pol3_beta_2. 1 hit.
PF02768. DNA_pol3_beta_3. 1 hit.
[Graphical view ]
PIRSFi PIRSF000804. DNA_pol_III_b. 1 hit.
SMARTi SM00480. POL3Bc. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00663. dnan. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JDR-2.

Entry informationi

Entry nameiC6CSZ8_PAESJ
AccessioniPrimary (citable) accession number: C6CSZ8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: September 3, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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