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C6CSZ8 (C6CSZ8_PAESJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA polymerase III subunit beta PIRNR PIRNR000804

EC=2.7.7.7 PIRNR PIRNR000804
Gene names
Ordered Locus Names:Pjdr2_0002 EMBL ACS98682.1
OrganismPaenibacillus sp. (strain JDR-2) [Complete proteome] [HAMAP] EMBL ACS98682.1
Taxonomic identifier324057 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

Protein attributes

Sequence length380 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA By similarity. PIRNR PIRNR000804

Catalytic activity

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). PIRNR PIRNR000804 SAAS SAAS022634

Subcellular location

Cytoplasm By similarity PIRNR PIRNR000804 SAAS SAAS022634.

Sequences

Sequence LengthMass (Da)Tools
C6CSZ8 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 80AA5D725055C77C

FASTA38042,147
        10         20         30         40         50         60 
MKLSISKHEL NEAIQQVAKA ASSRPTIPIL GGIKIEVTHQ GVTLTASDTD ISIQSFIPVE 

        70         80         90        100        110        120 
RDDLVIANVD KPGNVVLPAK FFVEIVKKLP SDNVEIEVGA HFQTLIRSGS TDIQMVGLDP 

       130        140        150        160        170        180 
EEFPVLPSIE QNELFQMPGD LLKAMIRQTV LAASVNEQTP ILTGVLWSLQ DKQLKFVATD 

       190        200        210        220        230        240 
RHRLASRIAQ AETAADYRFN NVVIAAKTLV ELSKLVPDQH GLVDIVVADN QVLFKIGNVL 

       250        260        270        280        290        300 
FYTRVLDGTY PDTSKIIPSV FKTELVLDTK KLTDAIDRAY LMSREEKTNI VRLATMEDGS 

       310        320        330        340        350        360 
IEISSSSTEL GRVTEQLEPK QFDGEPLKIA FNSKYMLDVL KVIDSEHIFI GFTGAMSPIV 

       370        380 
IRPTDHSYNT YVILPYRTTN 

« Hide

References

[1]"Complete genome sequence of Paenibacillus sp. strain JDR-2."
Chow V., Nong G., St John F.J., Rice J.D., Dickstein E., Chertkov O., Bruce D., Detter C., Brettin T., Han J., Woyke T., Pitluck S., Nolan M., Pati A., Martin J., Copeland A., Land M.L., Goodwin L. expand/collapse author list , Jones J.B., Ingram L.O., Shanmugam K.T., Preston J.F.
Stand. Genomic Sci. 6:1-10(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JDR-2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001656 Genomic DNA. Translation: ACS98682.1.
RefSeqYP_003008769.1. NC_012914.1.

3D structure databases

ProteinModelPortalC6CSZ8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING324057.Pjdr2_0002.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS98682; ACS98682; Pjdr2_0002.
GeneID8126975.
KEGGpjd:Pjdr2_0002.
PATRIC22830395. VBIPaeSp118865_0002.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0592.
HOGENOMHOG000071792.
KOK02338.
OMASHEGRNN.
OrthoDBEOG65J53F.

Enzyme and pathway databases

BioCycPSP324057:GH5H-2-MONOMER.

Family and domain databases

InterProIPR001001. DNA_polIII_beta.
IPR022635. DNA_polIII_beta_C.
IPR022637. DNA_polIII_beta_cen.
IPR022634. DNA_polIII_beta_N.
[Graphical view]
PfamPF00712. DNA_pol3_beta. 1 hit.
PF02767. DNA_pol3_beta_2. 1 hit.
PF02768. DNA_pol3_beta_3. 1 hit.
[Graphical view]
PIRSFPIRSF000804. DNA_pol_III_b. 1 hit.
SMARTSM00480. POL3Bc. 1 hit.
[Graphical view]
TIGRFAMsTIGR00663. dnan. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6CSZ8_PAESJ
AccessionPrimary (citable) accession number: C6CSZ8
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)