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C6CC22

- C6CC22_DICDC

UniProt

C6CC22 - C6CC22_DICDC

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Protein
Submitted name: Exodeoxyribonuclease V, beta subunit
Gene
Dd703_3007
Organism
Dickeya dadantii (strain Ech703)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. ATP-dependent DNA helicase activity Source: InterPro
  3. DNA binding Source: UniProtKB-KW
  4. exodeoxyribonuclease V activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. DNA repair Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

ExonucleaseSAAS annotations, HelicaseSAAS annotations, Hydrolase, Nuclease

Keywords - Biological processi

DNA damage, DNA repairSAAS annotations

Keywords - Ligandi

ATP-binding, DNA-bindingSAAS annotations, Nucleotide-binding

Enzyme and pathway databases

BioCyciDDAD579405:GHJU-3068-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Exodeoxyribonuclease V, beta subunitImported (EC:3.1.11.5Imported)
Gene namesi
Ordered Locus Names:Dd703_3007Imported
OrganismiDickeya dadantii (strain Ech703)Imported
Taxonomic identifieri579405 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeDickeya
ProteomesiUP000002734: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi579405.Dd703_3007.

Family & Domainsi

Sequence similaritiesi

Contains uvrD-like helicase ATP-binding domain.SAAS annotations
Contains uvrD-like helicase C-terminal domain.SAAS annotations

Phylogenomic databases

eggNOGiCOG1074.
HOGENOMiHOG000258330.
KOiK03582.
OMAiHIGELLQ.
OrthoDBiEOG6677M1.

Family and domain databases

Gene3Di3.40.50.300. 5 hits.
3.90.320.10. 1 hit.
InterProiIPR014017. DNA_helicase_UvrD-like_C.
IPR000212. DNA_helicase_UvrD/REP.
IPR004586. ExoDNase_V_bsu.
IPR011604. Exonuc_phg/RecB_C.
IPR027417. P-loop_NTPase.
IPR011335. Restrct_endonuc-II-like.
IPR014016. UvrD-like_ATP-bd.
[Graphical view]
PANTHERiPTHR11070. PTHR11070. 1 hit.
PfamiPF00580. UvrD-helicase. 1 hit.
PF13361. UvrD_C. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 4 hits.
SSF52980. SSF52980. 1 hit.
TIGRFAMsiTIGR00609. recB. 1 hit.
PROSITEiPS51198. UVRD_HELICASE_ATP_BIND. 1 hit.
PS51217. UVRD_HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6CC22-1 [UniParc]FASTAAdd to Basket

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MNERRSESLN LLTLPLLGER LIEASAGTGK TYTLAGLYLR LLLGLGGENA     50
YPRPLSVEEI LVVTFTEAAT QELRDRIRDK IHSLYLACLR NESDEPLVKL 100
LLAEIPDAFR AEAAQVLLRA ERQMDEAAVH TIHGFCQRML ATNAFESGVL 150
FEQRLVEDET PLYRQACADF WRRFCYPLPL SVASELGREW AGPDALLQDL 200
MPYLHGEMPL LRRPPDPDET LLARHQNIIA RLETFKAAWL GVAKELEALI 250
GSSGVDKRRY SSRYLPLWLS NVTAWAQQPT RNYQLPKELE RFGQRELNQR 300
TIKGEPPQHA IFLAVDDLLQ SSLTLRDLAI SLALSEVRLS IREEKQRRAE 350
LGFDDLLSRL DEALQQDAGQ ALAQAIRERY PLAMIDEFQD TDAQQYRIFS 400
TIYADQPQCG WLMIGDPKQA IYAFRGADIF TYMRAREDVP SHYTLDTNWR 450
STPGMVEAVN RLFQCADTPF VFSQIPFLPV NAADNNRSLT FEYQGSRMPA 500
MRFWLTGREG VGVGDYQQAM ARQCADSICS WLSAGQRGEA WLTRGEMRRP 550
VVASDITVLV RSRYEAALIR QALGRLNIPS VYLSNRDSVF AASEATELLW 600
LLQAVLAPEQ ERLLRGAMAT SLMGMDAAAL DELCRNESQW DALVDEFAGY 650
RHIWGQRGVL PMLRRLMQQH RLAENLLASP EGERRLTDVL HIGELLQEAS 700
AALDSEHALV RWLAQQIAQP NSQSESQQLR LESDRHLVQI VTIHKSKGLE 750
YALVWLPFIC NFRAQPQGIY HDRQTLLPTL DLNGGEESRT LAEEERLAED 800
LRLLYVALTR SIYHCAVGVA PLYLRSQKKE GNSDMHSSAL GYLLQRGAAA 850
PADVLVAALE AMAGDDIDIA DVVAEDGEPW RPALETAPLL QVRQNKRQLH 900
DRWRVTSYSG LQQHGASAIQ ELFPRLDLET KGEEAQAPDE AFTPHTFPRG 950
AAPGTFLHSL FEQLEFTAAI DEPWLLEQLR QQGMAEEWQP VVKAWLATVL 1000
DTPLTPEHIR LSALESRFRQ SELQFYLPIA SMLDAGKLDR LAKTHDPLSA 1050
DCPALDFQQV KGMLKGFIDL VFFWQGRYYL LDYKSNWLGP DAGAYTQPAM 1100
HRAMAEHRYD LQYQLYSLAL HRYLRHRVPG YDYQRHFGGV IYLFLRGISA 1150
AYPGHGVFFT KPAQLLVDGL DLLFQGDTTI MDDEGAGNA 1189
Length:1,189
Mass (Da):134,528
Last modified:September 1, 2009 - v1
Checksum:i208F5E1F3C58387E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001654 Genomic DNA. Translation: ACS86782.1.
RefSeqiYP_002988604.1. NC_012880.1.

Genome annotation databases

EnsemblBacteriaiACS86782; ACS86782; Dd703_3007.
GeneIDi8089842.
KEGGidda:Dd703_3007.
PATRICi21793583. VBIDicDad95084_3194.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001654 Genomic DNA. Translation: ACS86782.1 .
RefSeqi YP_002988604.1. NC_012880.1.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 579405.Dd703_3007.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACS86782 ; ACS86782 ; Dd703_3007 .
GeneIDi 8089842.
KEGGi dda:Dd703_3007.
PATRICi 21793583. VBIDicDad95084_3194.

Phylogenomic databases

eggNOGi COG1074.
HOGENOMi HOG000258330.
KOi K03582.
OMAi HIGELLQ.
OrthoDBi EOG6677M1.

Enzyme and pathway databases

BioCyci DDAD579405:GHJU-3068-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 5 hits.
3.90.320.10. 1 hit.
InterProi IPR014017. DNA_helicase_UvrD-like_C.
IPR000212. DNA_helicase_UvrD/REP.
IPR004586. ExoDNase_V_bsu.
IPR011604. Exonuc_phg/RecB_C.
IPR027417. P-loop_NTPase.
IPR011335. Restrct_endonuc-II-like.
IPR014016. UvrD-like_ATP-bd.
[Graphical view ]
PANTHERi PTHR11070. PTHR11070. 1 hit.
Pfami PF00580. UvrD-helicase. 1 hit.
PF13361. UvrD_C. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 4 hits.
SSF52980. SSF52980. 1 hit.
TIGRFAMsi TIGR00609. recB. 1 hit.
PROSITEi PS51198. UVRD_HELICASE_ATP_BIND. 1 hit.
PS51217. UVRD_HELICASE_CTER. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ech703Imported.

Entry informationi

Entry nameiC6CC22_DICDC
AccessioniPrimary (citable) accession number: C6CC22
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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