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C6CC22

- C6CC22_DICDC

UniProt

C6CC22 - C6CC22_DICDC

Protein
Submitted name:

Exodeoxyribonuclease V, beta subunit

Gene

Dd703_3007

Organism
Dickeya dadantii (strain Ech703)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. ATP-dependent DNA helicase activity Source: InterPro
    3. DNA binding Source: UniProtKB-KW
    4. exodeoxyribonuclease V activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA repair Source: UniProtKB-KW

    Keywords - Molecular functioni

    ExonucleaseSAAS annotation, HelicaseSAAS annotation, Hydrolase, Nuclease

    Keywords - Biological processi

    DNA damage, DNA repairSAAS annotation

    Keywords - Ligandi

    ATP-binding, DNA-bindingSAAS annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciDDAD579405:GHJU-3068-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Exodeoxyribonuclease V, beta subunitImported (EC:3.1.11.5Imported)
    Gene namesi
    Ordered Locus Names:Dd703_3007Imported
    OrganismiDickeya dadantii (strain Ech703)Imported
    Taxonomic identifieri579405 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeDickeya
    ProteomesiUP000002734: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi579405.Dd703_3007.

    Family & Domainsi

    Sequence similaritiesi

    Contains uvrD-like helicase ATP-binding domain.SAAS annotation
    Contains uvrD-like helicase C-terminal domain.SAAS annotation

    Phylogenomic databases

    eggNOGiCOG1074.
    HOGENOMiHOG000258330.
    KOiK03582.
    OMAiHIGELLQ.
    OrthoDBiEOG6677M1.

    Family and domain databases

    Gene3Di3.40.50.300. 5 hits.
    3.90.320.10. 1 hit.
    InterProiIPR014017. DNA_helicase_UvrD-like_C.
    IPR000212. DNA_helicase_UvrD/REP.
    IPR004586. ExoDNase_V_bsu.
    IPR011604. Exonuc_phg/RecB_C.
    IPR027417. P-loop_NTPase.
    IPR011335. Restrct_endonuc-II-like.
    IPR014016. UvrD-like_ATP-bd.
    [Graphical view]
    PANTHERiPTHR11070. PTHR11070. 1 hit.
    PfamiPF00580. UvrD-helicase. 1 hit.
    PF13361. UvrD_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 4 hits.
    SSF52980. SSF52980. 1 hit.
    TIGRFAMsiTIGR00609. recB. 1 hit.
    PROSITEiPS51198. UVRD_HELICASE_ATP_BIND. 1 hit.
    PS51217. UVRD_HELICASE_CTER. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C6CC22-1 [UniParc]FASTAAdd to Basket

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    MNERRSESLN LLTLPLLGER LIEASAGTGK TYTLAGLYLR LLLGLGGENA     50
    YPRPLSVEEI LVVTFTEAAT QELRDRIRDK IHSLYLACLR NESDEPLVKL 100
    LLAEIPDAFR AEAAQVLLRA ERQMDEAAVH TIHGFCQRML ATNAFESGVL 150
    FEQRLVEDET PLYRQACADF WRRFCYPLPL SVASELGREW AGPDALLQDL 200
    MPYLHGEMPL LRRPPDPDET LLARHQNIIA RLETFKAAWL GVAKELEALI 250
    GSSGVDKRRY SSRYLPLWLS NVTAWAQQPT RNYQLPKELE RFGQRELNQR 300
    TIKGEPPQHA IFLAVDDLLQ SSLTLRDLAI SLALSEVRLS IREEKQRRAE 350
    LGFDDLLSRL DEALQQDAGQ ALAQAIRERY PLAMIDEFQD TDAQQYRIFS 400
    TIYADQPQCG WLMIGDPKQA IYAFRGADIF TYMRAREDVP SHYTLDTNWR 450
    STPGMVEAVN RLFQCADTPF VFSQIPFLPV NAADNNRSLT FEYQGSRMPA 500
    MRFWLTGREG VGVGDYQQAM ARQCADSICS WLSAGQRGEA WLTRGEMRRP 550
    VVASDITVLV RSRYEAALIR QALGRLNIPS VYLSNRDSVF AASEATELLW 600
    LLQAVLAPEQ ERLLRGAMAT SLMGMDAAAL DELCRNESQW DALVDEFAGY 650
    RHIWGQRGVL PMLRRLMQQH RLAENLLASP EGERRLTDVL HIGELLQEAS 700
    AALDSEHALV RWLAQQIAQP NSQSESQQLR LESDRHLVQI VTIHKSKGLE 750
    YALVWLPFIC NFRAQPQGIY HDRQTLLPTL DLNGGEESRT LAEEERLAED 800
    LRLLYVALTR SIYHCAVGVA PLYLRSQKKE GNSDMHSSAL GYLLQRGAAA 850
    PADVLVAALE AMAGDDIDIA DVVAEDGEPW RPALETAPLL QVRQNKRQLH 900
    DRWRVTSYSG LQQHGASAIQ ELFPRLDLET KGEEAQAPDE AFTPHTFPRG 950
    AAPGTFLHSL FEQLEFTAAI DEPWLLEQLR QQGMAEEWQP VVKAWLATVL 1000
    DTPLTPEHIR LSALESRFRQ SELQFYLPIA SMLDAGKLDR LAKTHDPLSA 1050
    DCPALDFQQV KGMLKGFIDL VFFWQGRYYL LDYKSNWLGP DAGAYTQPAM 1100
    HRAMAEHRYD LQYQLYSLAL HRYLRHRVPG YDYQRHFGGV IYLFLRGISA 1150
    AYPGHGVFFT KPAQLLVDGL DLLFQGDTTI MDDEGAGNA 1189
    Length:1,189
    Mass (Da):134,528
    Last modified:September 1, 2009 - v1
    Checksum:i208F5E1F3C58387E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001654 Genomic DNA. Translation: ACS86782.1.
    RefSeqiYP_002988604.1. NC_012880.1.

    Genome annotation databases

    EnsemblBacteriaiACS86782; ACS86782; Dd703_3007.
    GeneIDi8089842.
    KEGGidda:Dd703_3007.
    PATRICi21793583. VBIDicDad95084_3194.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001654 Genomic DNA. Translation: ACS86782.1 .
    RefSeqi YP_002988604.1. NC_012880.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 579405.Dd703_3007.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACS86782 ; ACS86782 ; Dd703_3007 .
    GeneIDi 8089842.
    KEGGi dda:Dd703_3007.
    PATRICi 21793583. VBIDicDad95084_3194.

    Phylogenomic databases

    eggNOGi COG1074.
    HOGENOMi HOG000258330.
    KOi K03582.
    OMAi HIGELLQ.
    OrthoDBi EOG6677M1.

    Enzyme and pathway databases

    BioCyci DDAD579405:GHJU-3068-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 5 hits.
    3.90.320.10. 1 hit.
    InterProi IPR014017. DNA_helicase_UvrD-like_C.
    IPR000212. DNA_helicase_UvrD/REP.
    IPR004586. ExoDNase_V_bsu.
    IPR011604. Exonuc_phg/RecB_C.
    IPR027417. P-loop_NTPase.
    IPR011335. Restrct_endonuc-II-like.
    IPR014016. UvrD-like_ATP-bd.
    [Graphical view ]
    PANTHERi PTHR11070. PTHR11070. 1 hit.
    Pfami PF00580. UvrD-helicase. 1 hit.
    PF13361. UvrD_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 4 hits.
    SSF52980. SSF52980. 1 hit.
    TIGRFAMsi TIGR00609. recB. 1 hit.
    PROSITEi PS51198. UVRD_HELICASE_ATP_BIND. 1 hit.
    PS51217. UVRD_HELICASE_CTER. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ech703Imported.

    Entry informationi

    Entry nameiC6CC22_DICDC
    AccessioniPrimary (citable) accession number: C6CC22
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3