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C6CC22 (C6CC22_DICDC) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.1.11.5 EMBL ACS86782.1
Gene names
Ordered Locus Names:Dd703_3007 EMBL ACS86782.1
OrganismDickeya dadantii (strain Ech703) [Complete proteome] [HAMAP] EMBL ACS86782.1
Taxonomic identifier579405 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeDickeya

Protein attributes

Sequence length1189 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains uvrD-like helicase ATP-binding domain. SAAS SAAS014017

Contains uvrD-like helicase C-terminal domain. SAAS SAAS014017

Sequences

Sequence LengthMass (Da)Tools
C6CC22 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 208F5E1F3C58387E

FASTA1,189134,528
        10         20         30         40         50         60 
MNERRSESLN LLTLPLLGER LIEASAGTGK TYTLAGLYLR LLLGLGGENA YPRPLSVEEI 

        70         80         90        100        110        120 
LVVTFTEAAT QELRDRIRDK IHSLYLACLR NESDEPLVKL LLAEIPDAFR AEAAQVLLRA 

       130        140        150        160        170        180 
ERQMDEAAVH TIHGFCQRML ATNAFESGVL FEQRLVEDET PLYRQACADF WRRFCYPLPL 

       190        200        210        220        230        240 
SVASELGREW AGPDALLQDL MPYLHGEMPL LRRPPDPDET LLARHQNIIA RLETFKAAWL 

       250        260        270        280        290        300 
GVAKELEALI GSSGVDKRRY SSRYLPLWLS NVTAWAQQPT RNYQLPKELE RFGQRELNQR 

       310        320        330        340        350        360 
TIKGEPPQHA IFLAVDDLLQ SSLTLRDLAI SLALSEVRLS IREEKQRRAE LGFDDLLSRL 

       370        380        390        400        410        420 
DEALQQDAGQ ALAQAIRERY PLAMIDEFQD TDAQQYRIFS TIYADQPQCG WLMIGDPKQA 

       430        440        450        460        470        480 
IYAFRGADIF TYMRAREDVP SHYTLDTNWR STPGMVEAVN RLFQCADTPF VFSQIPFLPV 

       490        500        510        520        530        540 
NAADNNRSLT FEYQGSRMPA MRFWLTGREG VGVGDYQQAM ARQCADSICS WLSAGQRGEA 

       550        560        570        580        590        600 
WLTRGEMRRP VVASDITVLV RSRYEAALIR QALGRLNIPS VYLSNRDSVF AASEATELLW 

       610        620        630        640        650        660 
LLQAVLAPEQ ERLLRGAMAT SLMGMDAAAL DELCRNESQW DALVDEFAGY RHIWGQRGVL 

       670        680        690        700        710        720 
PMLRRLMQQH RLAENLLASP EGERRLTDVL HIGELLQEAS AALDSEHALV RWLAQQIAQP 

       730        740        750        760        770        780 
NSQSESQQLR LESDRHLVQI VTIHKSKGLE YALVWLPFIC NFRAQPQGIY HDRQTLLPTL 

       790        800        810        820        830        840 
DLNGGEESRT LAEEERLAED LRLLYVALTR SIYHCAVGVA PLYLRSQKKE GNSDMHSSAL 

       850        860        870        880        890        900 
GYLLQRGAAA PADVLVAALE AMAGDDIDIA DVVAEDGEPW RPALETAPLL QVRQNKRQLH 

       910        920        930        940        950        960 
DRWRVTSYSG LQQHGASAIQ ELFPRLDLET KGEEAQAPDE AFTPHTFPRG AAPGTFLHSL 

       970        980        990       1000       1010       1020 
FEQLEFTAAI DEPWLLEQLR QQGMAEEWQP VVKAWLATVL DTPLTPEHIR LSALESRFRQ 

      1030       1040       1050       1060       1070       1080 
SELQFYLPIA SMLDAGKLDR LAKTHDPLSA DCPALDFQQV KGMLKGFIDL VFFWQGRYYL 

      1090       1100       1110       1120       1130       1140 
LDYKSNWLGP DAGAYTQPAM HRAMAEHRYD LQYQLYSLAL HRYLRHRVPG YDYQRHFGGV 

      1150       1160       1170       1180 
IYLFLRGISA AYPGHGVFFT KPAQLLVDGL DLLFQGDTTI MDDEGAGNA 

« Hide

References

[1]"Complete sequence of Dickeya dadantii Ech703."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Balakrishnan V., Glasner J., Perna N.T.
Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ech703 EMBL ACS86782.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001654 Genomic DNA. Translation: ACS86782.1.
RefSeqYP_002988604.1. NC_012880.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING579405.Dd703_3007.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS86782; ACS86782; Dd703_3007.
GeneID8089842.
KEGGdda:Dd703_3007.
PATRIC21793583. VBIDicDad95084_3194.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1074.
HOGENOMHOG000258330.
KOK03582.
OMAHIGELLQ.
OrthoDBEOG6677M1.

Enzyme and pathway databases

BioCycDDAD579405:GHJU-3068-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 5 hits.
3.90.320.10. 1 hit.
InterProIPR014017. DNA_helicase_UvrD-like_C.
IPR000212. DNA_helicase_UvrD/REP.
IPR004586. ExoDNase_V_bsu.
IPR011604. Exonuc_phg/RecB_C.
IPR027417. P-loop_NTPase.
IPR011335. Restrct_endonuc-II-like.
IPR014016. UvrD-like_ATP-bd.
[Graphical view]
PANTHERPTHR11070. PTHR11070. 1 hit.
PfamPF00580. UvrD-helicase. 1 hit.
PF13361. UvrD_C. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 4 hits.
SSF52980. SSF52980. 1 hit.
TIGRFAMsTIGR00609. recB. 1 hit.
PROSITEPS51198. UVRD_HELICASE_ATP_BIND. 1 hit.
PS51217. UVRD_HELICASE_CTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6CC22_DICDC
AccessionPrimary (citable) accession number: C6CC22
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)