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C6CC22

- C6CC22_DICDC

UniProt

C6CC22 - C6CC22_DICDC

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Protein
Submitted name:

Exodeoxyribonuclease V, beta subunit

Gene

Dd703_3007

Organism
Dickeya dadantii (strain Ech703)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. ATP-dependent DNA helicase activity Source: InterPro
  3. DNA binding Source: UniProtKB-KW
  4. exodeoxyribonuclease V activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA repair Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

ExonucleaseSAAS annotation, HelicaseSAAS annotation, Hydrolase, Nuclease

Keywords - Biological processi

DNA damage, DNA repairSAAS annotation

Keywords - Ligandi

ATP-binding, DNA-bindingSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciDDAD579405:GHJU-3068-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Exodeoxyribonuclease V, beta subunitImported (EC:3.1.11.5Imported)
Gene namesi
Ordered Locus Names:Dd703_3007Imported
OrganismiDickeya dadantii (strain Ech703)Imported
Taxonomic identifieri579405 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeDickeya
ProteomesiUP000002734: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi579405.Dd703_3007.

Family & Domainsi

Sequence similaritiesi

Contains uvrD-like helicase ATP-binding domain.SAAS annotation
Contains uvrD-like helicase C-terminal domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG1074.
HOGENOMiHOG000258330.
KOiK03582.
OMAiHIGELLQ.
OrthoDBiEOG6677M1.

Family and domain databases

Gene3Di3.40.50.300. 5 hits.
3.90.320.10. 1 hit.
InterProiIPR014017. DNA_helicase_UvrD-like_C.
IPR000212. DNA_helicase_UvrD/REP.
IPR004586. ExoDNase_V_bsu.
IPR011604. Exonuc_phg/RecB_C.
IPR027417. P-loop_NTPase.
IPR011335. Restrct_endonuc-II-like.
IPR014016. UvrD-like_ATP-bd.
[Graphical view]
PANTHERiPTHR11070. PTHR11070. 1 hit.
PfamiPF00580. UvrD-helicase. 1 hit.
PF13361. UvrD_C. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 4 hits.
SSF52980. SSF52980. 1 hit.
TIGRFAMsiTIGR00609. recB. 1 hit.
PROSITEiPS51198. UVRD_HELICASE_ATP_BIND. 1 hit.
PS51217. UVRD_HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6CC22-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNERRSESLN LLTLPLLGER LIEASAGTGK TYTLAGLYLR LLLGLGGENA
60 70 80 90 100
YPRPLSVEEI LVVTFTEAAT QELRDRIRDK IHSLYLACLR NESDEPLVKL
110 120 130 140 150
LLAEIPDAFR AEAAQVLLRA ERQMDEAAVH TIHGFCQRML ATNAFESGVL
160 170 180 190 200
FEQRLVEDET PLYRQACADF WRRFCYPLPL SVASELGREW AGPDALLQDL
210 220 230 240 250
MPYLHGEMPL LRRPPDPDET LLARHQNIIA RLETFKAAWL GVAKELEALI
260 270 280 290 300
GSSGVDKRRY SSRYLPLWLS NVTAWAQQPT RNYQLPKELE RFGQRELNQR
310 320 330 340 350
TIKGEPPQHA IFLAVDDLLQ SSLTLRDLAI SLALSEVRLS IREEKQRRAE
360 370 380 390 400
LGFDDLLSRL DEALQQDAGQ ALAQAIRERY PLAMIDEFQD TDAQQYRIFS
410 420 430 440 450
TIYADQPQCG WLMIGDPKQA IYAFRGADIF TYMRAREDVP SHYTLDTNWR
460 470 480 490 500
STPGMVEAVN RLFQCADTPF VFSQIPFLPV NAADNNRSLT FEYQGSRMPA
510 520 530 540 550
MRFWLTGREG VGVGDYQQAM ARQCADSICS WLSAGQRGEA WLTRGEMRRP
560 570 580 590 600
VVASDITVLV RSRYEAALIR QALGRLNIPS VYLSNRDSVF AASEATELLW
610 620 630 640 650
LLQAVLAPEQ ERLLRGAMAT SLMGMDAAAL DELCRNESQW DALVDEFAGY
660 670 680 690 700
RHIWGQRGVL PMLRRLMQQH RLAENLLASP EGERRLTDVL HIGELLQEAS
710 720 730 740 750
AALDSEHALV RWLAQQIAQP NSQSESQQLR LESDRHLVQI VTIHKSKGLE
760 770 780 790 800
YALVWLPFIC NFRAQPQGIY HDRQTLLPTL DLNGGEESRT LAEEERLAED
810 820 830 840 850
LRLLYVALTR SIYHCAVGVA PLYLRSQKKE GNSDMHSSAL GYLLQRGAAA
860 870 880 890 900
PADVLVAALE AMAGDDIDIA DVVAEDGEPW RPALETAPLL QVRQNKRQLH
910 920 930 940 950
DRWRVTSYSG LQQHGASAIQ ELFPRLDLET KGEEAQAPDE AFTPHTFPRG
960 970 980 990 1000
AAPGTFLHSL FEQLEFTAAI DEPWLLEQLR QQGMAEEWQP VVKAWLATVL
1010 1020 1030 1040 1050
DTPLTPEHIR LSALESRFRQ SELQFYLPIA SMLDAGKLDR LAKTHDPLSA
1060 1070 1080 1090 1100
DCPALDFQQV KGMLKGFIDL VFFWQGRYYL LDYKSNWLGP DAGAYTQPAM
1110 1120 1130 1140 1150
HRAMAEHRYD LQYQLYSLAL HRYLRHRVPG YDYQRHFGGV IYLFLRGISA
1160 1170 1180
AYPGHGVFFT KPAQLLVDGL DLLFQGDTTI MDDEGAGNA
Length:1,189
Mass (Da):134,528
Last modified:September 1, 2009 - v1
Checksum:i208F5E1F3C58387E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001654 Genomic DNA. Translation: ACS86782.1.
RefSeqiYP_002988604.1. NC_012880.1.

Genome annotation databases

EnsemblBacteriaiACS86782; ACS86782; Dd703_3007.
GeneIDi8089842.
KEGGidda:Dd703_3007.
PATRICi21793583. VBIDicDad95084_3194.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001654 Genomic DNA. Translation: ACS86782.1 .
RefSeqi YP_002988604.1. NC_012880.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 579405.Dd703_3007.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACS86782 ; ACS86782 ; Dd703_3007 .
GeneIDi 8089842.
KEGGi dda:Dd703_3007.
PATRICi 21793583. VBIDicDad95084_3194.

Phylogenomic databases

eggNOGi COG1074.
HOGENOMi HOG000258330.
KOi K03582.
OMAi HIGELLQ.
OrthoDBi EOG6677M1.

Enzyme and pathway databases

BioCyci DDAD579405:GHJU-3068-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 5 hits.
3.90.320.10. 1 hit.
InterProi IPR014017. DNA_helicase_UvrD-like_C.
IPR000212. DNA_helicase_UvrD/REP.
IPR004586. ExoDNase_V_bsu.
IPR011604. Exonuc_phg/RecB_C.
IPR027417. P-loop_NTPase.
IPR011335. Restrct_endonuc-II-like.
IPR014016. UvrD-like_ATP-bd.
[Graphical view ]
PANTHERi PTHR11070. PTHR11070. 1 hit.
Pfami PF00580. UvrD-helicase. 1 hit.
PF13361. UvrD_C. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 4 hits.
SSF52980. SSF52980. 1 hit.
TIGRFAMsi TIGR00609. recB. 1 hit.
PROSITEi PS51198. UVRD_HELICASE_ATP_BIND. 1 hit.
PS51217. UVRD_HELICASE_CTER. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ech703Imported.

Entry informationi

Entry nameiC6CC22_DICDC
AccessioniPrimary (citable) accession number: C6CC22
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: October 1, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3