Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

C6C9N5 (C6C9N5_DICDC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=2.3.1.12 EMBL ACS84486.1
Gene names
Ordered Locus Names:Dd703_0675 EMBL ACS84486.1
OrganismDickeya dadantii (strain Ech703) [Complete proteome] [HAMAP] EMBL ACS84486.1
Taxonomic identifier579405 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeDickeya

Protein attributes

Sequence length616 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 2-oxoacid dehydrogenase family.

Contains 3 lipoyl-binding domains. RuleBase RU000447

Sequences

Sequence LengthMass (Da)Tools
C6C9N5 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 5788BB7835C5A854

FASTA61663,922
        10         20         30         40         50         60 
MAIEINVPDI GADEVEVTEV LVKVGDKVEA EQSLITVEGD KASMEVPSPQ AGVVKEIKIA 

        70         80         90        100        110        120 
VGDKVATGKL IMVFEAAGAP APAAAPAASA VKDVEVPDIG GDEVEVTEVL VKVGDTVAAE 

       130        140        150        160        170        180 
QSLITVEGDK ASMEVPAPFA GTVKEIKVST GSKVKTGTLI MVFEVAGAAP AVAAPAAAVS 

       190        200        210        220        230        240 
ALAAAPAVSG GAKDVNVPDI GGDEVEVTEV LVKVGDTVAA EQSLITVEGD KASMEVPAPF 

       250        260        270        280        290        300 
AGTVKEIKIS TGSKVKTGSL IMVFEVAGAA PAAAAAPAPV AAAPAASAPA AASAPAKADG 

       310        320        330        340        350        360 
KGEFAENDAY VHATPVIRRL AREFGVNLAK VKGTGRKGRI LREDVQAYVK DAVKRAESAP 

       370        380        390        400        410        420 
AAGATGGSLP GLLPWPKVDF SKFGEVEEVE LGRIQKISGA NLSRNWVMIP HVTHFDKTDI 

       430        440        450        460        470        480 
TDLEAFRKQQ NAEAEKRKLD VKFTPVVFIM KAVAAALEQM PRFNSSLSED AQRLTLKKYI 

       490        500        510        520        530        540 
NIGVAVDTPN GLVVPVFKDV NKKGIVELSR ELTVISKKAR DGKLTAGEMQ GGCFTISSIG 

       550        560        570        580        590        600 
GLGTTHFAPI VNAPEVAILG VSKSAMEPVW NGKEFVPRLM MPISLSFDHR VIDGADGARF 

       610 
ITIINNTLSD IRRLVM 

« Hide

References

[1]"Complete sequence of Dickeya dadantii Ech703."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Balakrishnan V., Glasner J., Perna N.T.
Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ech703 EMBL ACS84486.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001654 Genomic DNA. Translation: ACS84486.1.
RefSeqYP_002986308.1. NC_012880.1.

3D structure databases

ProteinModelPortalC6C9N5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING579405.Dd703_0675.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS84486; ACS84486; Dd703_0675.
GeneID8089082.
KEGGdda:Dd703_0675.
PATRIC21788540. VBIDicDad95084_0720.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0508.
HOGENOMHOG000281562.
KOK00627.
OMATEIMVAV.
OrthoDBEOG610413.
ProtClustDBPRK11854.

Enzyme and pathway databases

BioCycDDAD579405:GHJU-688-MONOMER.

Family and domain databases

Gene3D3.30.559.10. 1 hit.
4.10.320.10. 1 hit.
InterProIPR003016. 2-oxoA_DH_lipoyl-BS.
IPR001078. 2-oxoacid_DH_actylTfrase.
IPR006256. AcTrfase_Pyrv_DH_cplx.
IPR000089. Biotin_lipoyl.
IPR023213. CAT-like_dom.
IPR004167. E3-bd.
IPR011053. Single_hybrid_motif.
[Graphical view]
PfamPF00198. 2-oxoacid_dh. 1 hit.
PF00364. Biotin_lipoyl. 3 hits.
PF02817. E3_binding. 1 hit.
[Graphical view]
SUPFAMSSF47005. SSF47005. 1 hit.
SSF51230. SSF51230. 3 hits.
TIGRFAMsTIGR01348. PDHac_trf_long. 1 hit.
PROSITEPS50968. BIOTINYL_LIPOYL. 3 hits.
PS00189. LIPOYL. 3 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6C9N5_DICDC
AccessionPrimary (citable) accession number: C6C9N5
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: November 13, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)