C6C8C4 (C6C8C4_DICDC) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 28.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: GTP cyclohydrolase 1 HAMAP-Rule MF_00223 EC=3.5.4.16 HAMAP-Rule MF_00223 Alternative name(s): GTP cyclohydrolase I HAMAP-Rule MF_00223 | ||||
| Gene names |
| ||||
| Organism | Dickeya dadantii (strain Ech703) [Complete proteome] [HAMAP] EMBL ACS86090.1 | ||||
| Taxonomic identifier | 579405 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Dickeya › ![]() |
Protein attributes
| Sequence length | 222 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | GTP + H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate. HAMAP-Rule MF_00223 SAAS SAAS001474 |
| Pathway | Cofactor biosynthesis; 7,8-dihydroneopterin triphosphate biosynthesis; 7,8-dihydroneopterin triphosphate from GTP: step 1/1. HAMAP-Rule MF_00223 SAAS SAAS001474 |
| Subunit structure | Homopolymer By similarity. HAMAP-Rule MF_00223 |
| Sequence similarities | Belongs to the GTP cyclohydrolase I family. HAMAP-Rule MF_00223 |
Ontologies
| Keywords | |
|---|---|
| Biological process | One-carbon metabolism HAMAP-Rule MF_00223 |
| Ligand | GTP-binding HAMAP-Rule MF_00223 Metal-binding HAMAP-Rule MF_00223 SAAS SAAS001474 Nucleotide-binding Zinc HAMAP-Rule MF_00223 SAAS SAAS001474 |
| Molecular function | Hydrolase HAMAP-Rule MF_00223 SAAS SAAS001474 EMBL ACS86090.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | 7,8-dihydroneopterin 3'-triphosphate biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway one-carbon metabolic processInferred from electronic annotation. Source: HAMAP tetrahydrofolate biosynthetic processInferred from electronic annotation. Source: HAMAP |
| Cellular_component | cytoplasm Inferred from electronic annotation. Source: InterPro |
| Molecular_function | GTP binding Inferred from electronic annotation. Source: UniProtKB-KW GTP cyclohydrolase I activityInferred from electronic annotation. Source: HAMAP zinc ion bindingInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Sites | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Metal binding | 110 | 1 | Zinc By similarity HAMAP-Rule MF_00223 | ||||||
| Metal binding | 113 | 1 | Zinc By similarity HAMAP-Rule MF_00223 | ||||||
| Metal binding | 181 | 1 | Zinc By similarity HAMAP-Rule MF_00223 | ||||||
Sequences
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References
| [1] | "Complete sequence of Dickeya dadantii Ech703." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. Perna N.T.Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ech703. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001654 Genomic DNA. Translation: ACS86090.1. |
| RefSeq | YP_002987912.1. NC_012880.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 579405.Dd703_2306. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ACS86090; ACS86090; Dd703_2306. |
| GeneID | 8086693. |
| KEGG | dda:Dd703_2306. |
| PATRIC | 21792093. VBIDicDad95084_2468. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0302. |
| HOGENOM | HOG000221222. |
| KO | K01495. |
| OMA | FYGKVHI. |
| ProtClustDB | PRK09347. |
Enzyme and pathway databases | |
| BioCyc | DDAD579405:GHJU-2348-MONOMER. |
| UniPathway | UPA00848; UER00151. |
Family and domain databases | |
| HAMAP | MF_00223. FolE. |
| InterPro | IPR001474. GTP_CycHdrlase_I. IPR020602. GTP_CycHdrlase_I/CN_OxRdtase. IPR018234. GTP_CycHdrlase_I_CS. [Graphical view] |
| PANTHER | PTHR11109. PTHR11109. 1 hit. |
| Pfam | PF01227. GTP_cyclohydroI. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00063. folE. 1 hit. |
| PROSITE | PS00859. GTP_CYCLOHYDROL_1_1. 1 hit. PS00860. GTP_CYCLOHYDROL_1_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | C6C8C4_DICDC | ||||||||
| Accession | Primary (citable) accession number: C6C8C4 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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