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C6BWG5

- C6BWG5_DESAD

UniProt

C6BWG5 - C6BWG5_DESAD

Protein
Submitted name:

TRAP dicarboxylate transporter-DctP subunit

Gene

Desal_0342

Organism
Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. transport Source: InterPro

    Enzyme and pathway databases

    BioCyciDSAL526222:GHES-350-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    TRAP dicarboxylate transporter-DctP subunitImported
    Gene namesi
    Ordered Locus Names:Desal_0342Imported
    OrganismiDesulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763)Imported
    Taxonomic identifieri526222 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
    ProteomesiUP000002601: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. outer membrane-bounded periplasmic space Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2727 PotentialImportedAdd
    BLAST
    Chaini28 – 333306 PotentialImportedPRO_5000482727Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi526222.Desal_0342.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4N6KX-ray1.20A1-333[»]
    ProteinModelPortaliC6BWG5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG1638.
    HOGENOMiHOG000294793.
    OMAiANTRHIL.
    OrthoDBiEOG66MQM6.

    Family and domain databases

    InterProiIPR018389. Extracellular_bind_fam7.
    [Graphical view]
    PfamiPF03480. SBP_bac_7. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    C6BWG5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSFKKTFSVL CAGAVLILSM STICMADDYK LTLKLSHVFS PAEQLSKSMD    50
    AVAESIYEKT DGAINIQTFP QAQLPAYKEG VEQVVRGAKF ISVEDPSFIG 100
    DYVPDFKALY APMLYRSFDE YVNLTQSDLV KKMQAEAEKQ GIKILALDYI 150
    YGFRNLITQK VIKTPADLKG MKIRTPGSKS YIDTLTAMGA VATPLPWGET 200
    LSAVQQGVVD GLEGSEFTNI GTKVYEGPTK NVANTRHILG TCGVYISTKV 250
    WNDIPAKYQK IIQDEFTNGA NHMVNLLKSQ HGGVVKELES YGVKFNEVDG 300
    DAFRAALKPL YKEQKGMTPG IYQSIFKELD AMR 333
    Length:333
    Mass (Da):36,811
    Last modified:September 1, 2009 - v1
    Checksum:i36669B81E832A930
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001649 Genomic DNA. Translation: ACS78409.1.
    RefSeqiYP_002989948.1. NC_012881.1.

    Genome annotation databases

    EnsemblBacteriaiACS78409; ACS78409; Desal_0342.
    GeneIDi8094120.
    KEGGidsa:Desal_0342.
    PATRICi21756121. VBIDesSal121003_0339.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001649 Genomic DNA. Translation: ACS78409.1 .
    RefSeqi YP_002989948.1. NC_012881.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4N6K X-ray 1.20 A 1-333 [» ]
    ProteinModelPortali C6BWG5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 526222.Desal_0342.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACS78409 ; ACS78409 ; Desal_0342 .
    GeneIDi 8094120.
    KEGGi dsa:Desal_0342.
    PATRICi 21756121. VBIDesSal121003_0339.

    Phylogenomic databases

    eggNOGi COG1638.
    HOGENOMi HOG000294793.
    OMAi ANTRHIL.
    OrthoDBi EOG66MQM6.

    Enzyme and pathway databases

    BioCyci DSAL526222:GHES-350-MONOMER.

    Family and domain databases

    InterProi IPR018389. Extracellular_bind_fam7.
    [Graphical view ]
    Pfami PF03480. SBP_bac_7. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763Imported.
    2. "Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio salexigens DSM2638, Target EFI-510113 (Desal_0342), complex with diglycerolphosphate."
      Vetting M.W., Al Obaidi N.F., Morisco L.L., Wasserman S.R., Sojitra S., Stead M., Attonito J.D., Scott Glenn A., Chowdhury S., Evans B., Hillerich B., Love J., Seidel R.D., Imker H.J., Gerlt J.A., Almo S.C.
      Submitted (OCT-2013) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (1.20 ANGSTROMS).

    Entry informationi

    Entry nameiC6BWG5_DESAD
    AccessioniPrimary (citable) accession number: C6BWG5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3