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C6BWG5

- C6BWG5_DESAD

UniProt

C6BWG5 - C6BWG5_DESAD

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Protein
Submitted name: TRAP dicarboxylate transporter-DctP subunit
Gene
Desal_0342
Organism
Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Biological processi

  1. transport Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciDSAL526222:GHES-350-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
TRAP dicarboxylate transporter-DctP subunitImported
Gene namesi
Ordered Locus Names:Desal_0342Imported
OrganismiDesulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763)Imported
Taxonomic identifieri526222 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
ProteomesiUP000002601: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. outer membrane-bounded periplasmic space Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2727 PredictedImported
Add
BLAST
Chaini28 – 333306 PredictedImported
PRO_5000482727Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi526222.Desal_0342.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4N6KX-ray1.20A1-333[»]
ProteinModelPortaliC6BWG5.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG1638.
HOGENOMiHOG000294793.
OMAiANTRHIL.
OrthoDBiEOG66MQM6.

Family and domain databases

InterProiIPR018389. Extracellular_bind_fam7.
[Graphical view]
PfamiPF03480. SBP_bac_7. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C6BWG5-1 [UniParc]FASTAAdd to Basket

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MSFKKTFSVL CAGAVLILSM STICMADDYK LTLKLSHVFS PAEQLSKSMD    50
AVAESIYEKT DGAINIQTFP QAQLPAYKEG VEQVVRGAKF ISVEDPSFIG 100
DYVPDFKALY APMLYRSFDE YVNLTQSDLV KKMQAEAEKQ GIKILALDYI 150
YGFRNLITQK VIKTPADLKG MKIRTPGSKS YIDTLTAMGA VATPLPWGET 200
LSAVQQGVVD GLEGSEFTNI GTKVYEGPTK NVANTRHILG TCGVYISTKV 250
WNDIPAKYQK IIQDEFTNGA NHMVNLLKSQ HGGVVKELES YGVKFNEVDG 300
DAFRAALKPL YKEQKGMTPG IYQSIFKELD AMR 333
Length:333
Mass (Da):36,811
Last modified:September 1, 2009 - v1
Checksum:i36669B81E832A930
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001649 Genomic DNA. Translation: ACS78409.1.
RefSeqiYP_002989948.1. NC_012881.1.

Genome annotation databases

EnsemblBacteriaiACS78409; ACS78409; Desal_0342.
GeneIDi8094120.
KEGGidsa:Desal_0342.
PATRICi21756121. VBIDesSal121003_0339.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001649 Genomic DNA. Translation: ACS78409.1 .
RefSeqi YP_002989948.1. NC_012881.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4N6K X-ray 1.20 A 1-333 [» ]
ProteinModelPortali C6BWG5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 526222.Desal_0342.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACS78409 ; ACS78409 ; Desal_0342 .
GeneIDi 8094120.
KEGGi dsa:Desal_0342.
PATRICi 21756121. VBIDesSal121003_0339.

Phylogenomic databases

eggNOGi COG1638.
HOGENOMi HOG000294793.
OMAi ANTRHIL.
OrthoDBi EOG66MQM6.

Enzyme and pathway databases

BioCyci DSAL526222:GHES-350-MONOMER.

Family and domain databases

InterProi IPR018389. Extracellular_bind_fam7.
[Graphical view ]
Pfami PF03480. SBP_bac_7. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763.
  2. "Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio salexigens DSM2638, Target EFI-510113 (Desal_0342), complex with diglycerolphosphate."
    Vetting M.W., Al Obaidi N.F., Morisco L.L., Wasserman S.R., Sojitra S., Stead M., Attonito J.D., Scott Glenn A., Chowdhury S., Evans B., Hillerich B., Love J., Seidel R.D., Imker H.J., Gerlt J.A., Almo S.C.
    Submitted (OCT-2013) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.20 ANGSTROMS).

Entry informationi

Entry nameiC6BWG5_DESAD
AccessioniPrimary (citable) accession number: C6BWG5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome

External Data

Dasty 3

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