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C6BWG5 (C6BWG5_DESAD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length333 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

Ontologies

Keywords
   DomainSignal EMBL ACS78409.1
   Technical term3D-structure PDB 4N6K
Complete proteome
Gene Ontology (GO)
   Biological_processtransport

Inferred from electronic annotation. Source: InterPro

   Cellular_componentouter membrane-bounded periplasmic space

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2727 Potential EMBL ACS78409.1
Chain28 – 333306 Potential EMBL ACS78409.1
PRO_5000482727

Sequences

Sequence LengthMass (Da)Tools
C6BWG5 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 36669B81E832A930

FASTA33336,811
        10         20         30         40         50         60 
MSFKKTFSVL CAGAVLILSM STICMADDYK LTLKLSHVFS PAEQLSKSMD AVAESIYEKT 

        70         80         90        100        110        120 
DGAINIQTFP QAQLPAYKEG VEQVVRGAKF ISVEDPSFIG DYVPDFKALY APMLYRSFDE 

       130        140        150        160        170        180 
YVNLTQSDLV KKMQAEAEKQ GIKILALDYI YGFRNLITQK VIKTPADLKG MKIRTPGSKS 

       190        200        210        220        230        240 
YIDTLTAMGA VATPLPWGET LSAVQQGVVD GLEGSEFTNI GTKVYEGPTK NVANTRHILG 

       250        260        270        280        290        300 
TCGVYISTKV WNDIPAKYQK IIQDEFTNGA NHMVNLLKSQ HGGVVKELES YGVKFNEVDG 

       310        320        330 
DAFRAALKPL YKEQKGMTPG IYQSIFKELD AMR 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of Desulfovibrio salexigens DSM 2638."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I. expand/collapse author list , Wall J.D., Arkin A.P., Dehal P., Chivian D., Giles B., Hazen T.C.
Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763.
[2]"Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio salexigens DSM2638, Target EFI-510113 (Desal_0342), complex with diglycerolphosphate."
Vetting M.W., Al Obaidi N.F., Morisco L.L., Wasserman S.R., Sojitra S., Stead M., Attonito J.D., Scott Glenn A., Chowdhury S., Evans B., Hillerich B., Love J., Seidel R.D., Imker H.J., Gerlt J.A., Almo S.C.
Submitted (OCT-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.20 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001649 Genomic DNA. Translation: ACS78409.1.
RefSeqYP_002989948.1. NC_012881.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4N6KX-ray1.20A1-333[»]
ProteinModelPortalC6BWG5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING526222.Desal_0342.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS78409; ACS78409; Desal_0342.
GeneID8094120.
KEGGdsa:Desal_0342.
PATRIC21756121. VBIDesSal121003_0339.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1638.
HOGENOMHOG000294793.
OMAANTRHIL.
OrthoDBEOG66MQM6.

Enzyme and pathway databases

BioCycDSAL526222:GHES-350-MONOMER.

Family and domain databases

InterProIPR018389. Extracellular_bind_fam7.
[Graphical view]
PfamPF03480. SBP_bac_7. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6BWG5_DESAD
AccessionPrimary (citable) accession number: C6BWG5
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)