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C6BRX2 (C6BRX2_DESAD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length382 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase SAAS SAAS020622 RuleBase RU000608 EMBL ACS81355.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6BRX2 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 0975E2390630E382

FASTA38241,899
        10         20         30         40         50         60 
MNNPKTFAPI WAEVDLSAIS HNFSEVQRLV NKQSKIMAVV KADAYGHGLT KVADCLNKAG 

        70         80         90        100        110        120 
ADYFAVARLD EAVALRNHGI EKPILILGYT PPEAATELLK HKVIQTVFSS EYAKDLNEKL 

       130        140        150        160        170        180 
NQTNKTLKVH IKIDTGMGRL GLVDEFNDGA VLESISTINR LPNLETEGVY THFAASDEAD 

       190        200        210        220        230        240 
KTSALEQLKQ FKNILAGIER RGISIPLKHA ANSAAIIDLP ESYFDMVRPG IMLYGLYPSN 

       250        260        270        280        290        300 
GVHQQNAELR PAMQIKARIA QTKEVPAGFR ISYGHTYTTP NATKLATIPL GYADGYRRQL 

       310        320        330        340        350        360 
SSAGKVLVHG QHASIVGRVC MDQSVIDVGK IENVEAGDEV VIIGRQEQAE ISAERMACEL 

       370        380 
GTINYEIVST LMARVPRIFK DS

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References

[1]"Complete sequence of Desulfovibrio salexigens DSM 2638."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I. expand/collapse author list , Wall J.D., Arkin A.P., Dehal P., Chivian D., Giles B., Hazen T.C.
Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001649 Genomic DNA. Translation: ACS81355.1.
RefSeqYP_002992894.1. NC_012881.1.

3D structure databases

ProteinModelPortalC6BRX2.
ModBaseSearch...

Protein-protein interaction databases

STRING526222.Desal_3305.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS81355; ACS81355; Desal_3305.
GeneID8094315.
KEGGdsa:Desal_3305.
PATRIC21762239. VBIDesSal121003_3312.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.

Enzyme and pathway databases

BioCycDSAL526222:GHES-3400-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6BRX2_DESAD
AccessionPrimary (citable) accession number: C6BRX2
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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