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C6BMJ2 (C6BMJ2_RALP1) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rpic12D_4051 EMBL ACS65300.1
OrganismRalstonia pickettii (strain 12D) [Complete proteome] [HAMAP] EMBL ACS65300.1
Taxonomic identifier428406 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia

Protein attributes

Sequence length1164 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C6BMJ2 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: E953DF84E9272AE0

FASTA1,164130,417
        10         20         30         40         50         60 
MTRNPTALLV DDALWYKDAV IYQLHVKSFC DSDNDGVGDF PGLISKLDYI AELGVDVIWL 

        70         80         90        100        110        120 
LPFYPSPRRD DGYDIAEYRG VHPDYGNMAD VRRFIAEAHA RGLRVITELV INHTSDQHPW 

       130        140        150        160        170        180 
FQRARRAKPG SALRDFYVWS DNDKRYAGTR IIFIDTEPSN WTWDPVANAY YWHRFYSHQP 

       190        200        210        220        230        240 
DLNFDNPRVL KAVIGVMKFW LNLGVDGLRL DAVPYLVERE GTSNENLPET HEVLRKIRAA 

       250        260        270        280        290        300 
MDGEFKNRLL LAEANQWPED TQEYFGAGDE CHMAFHFPLM PRMYMAIARE DRFPITDIMR 

       310        320        330        340        350        360 
QTPEVPAGCQ WAIFLRNHDE LTLEMVTDAE RDYLWEVYAS DRRARLNLGI RRRLAPLLER 

       370        380        390        400        410        420 
DRRRVELMNS LLFSMPGTPV MYYGDEIGMG DNIHLGDRDG VRTPMQWSPD RNGGFSRADP 

       430        440        450        460        470        480 
EQLVLPAIMG SLYGYESVNV EAQSRDAHSL LNWTRRLLAT RKRHRVFGRG SIQFLQPSNR 

       490        500        510        520        530        540 
KVLAYIRALE GEAPILCVAN LSRASQAVEL DLSTFAQRVP VELIGGTAFP PIGQLSYLLT 

       550        560        570        580        590        600 
LPPYAFYWLE LRENEPGPTW SQPAAEQLPE FTTLVLRAGL DALADTRQRE AHRQLIEREI 

       610        620        630        640        650        660 
LPTYLPKRRW FAAKDSVLRS AKFAWGAPVP VDAASTNRPL AGATRPEVFL NEVAVTLGSP 

       670        680        690        700        710        720 
DGTERVERYL LPLSIAWESA TLPALPIQLA LARVRRGRHV GYLTDAFTTE TFARALLTNL 

       730        740        750        760        770        780 
VRGTTLEAND GTVHFEPEPN IAELAEPAGA PEAGSTRPAP LPLAPDTPIQ WLAAEQSNSS 

       790        800        810        820        830        840 
LVIGESVIVK LIRRIATGIH PEVEMTRHLT RVGYANTAAL IGEVSHHAAD GERATLAVMQ 

       850        860        870        880        890        900 
SFVPNQGDAW TWALDYLRRT IDELAVQMEG VTTGDGESSP VAVSEARVDT DEALAGYVNF 

       910        920        930        940        950        960 
IGVIGTRLGE LHAALAAPTE DPNFGARIAD ADDATYWIAR VSEQLTRAHD NLTAWQRQNP 

       970        980        990       1000       1010       1020 
DSARQPDVQW LLSQHQALLD AARAHAENGL GATLSRIHGD FHLGQVLVAQ GDAFLIDFEG 

      1030       1040       1050       1060       1070       1080 
EPSRPVEERR RKTSPLRDVA GLMRSLDYVV GAMRQGPDHV AGPAQERRNV LLERFRAAST 

      1090       1100       1110       1120       1130       1140 
ERFLEAYAAA IRGPDLNALD QPVVDFHLLD LFLLEKAAYE VNYEASNRPT WLPIPLEGFT 

      1150       1160 
RVARRLLHAE PPSPAAEDPT GGPP 

« Hide

References

[1]"Complete sequence chromosome 2 of Ralstonia pickettii 12D."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Meincke L., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Ovchinnikova G., Marsh T., Richardson P.
Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 12D EMBL ACS65300.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001645 Genomic DNA. Translation: ACS65300.1.
RefSeqYP_002983972.1. NC_012857.1.

3D structure databases

ProteinModelPortalC6BMJ2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING428406.Rpic12D_4051.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS65300; ACS65300; Rpic12D_4051.
GeneID8021739.
KEGGrpf:Rpic12D_4051.
PATRIC20247170. VBIRalPic57998_4646.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMAGTRIIFT.
OrthoDBEOG6RVFV2.

Enzyme and pathway databases

BioCycRPIC428406:GH9Y-4114-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6BMJ2_RALP1
AccessionPrimary (citable) accession number: C6BMJ2
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)