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C6B5F3 (C6B5F3_RHILS) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1093 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C6B5F3 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 80E2B365F8A0E08D

FASTA1,093123,118
        10         20         30         40         50         60 
MDTMNADSAS QPLWYKDAII YQLHIKSFYD ANGDGVGDFA GLHQKLDHIA ALGVNAIWLL 

        70         80         90        100        110        120 
PFFPSPRRDD GYDIADYGSV SPDYGTVEDF RAFVDAAHQR NIRVIIELVI NHTSDQHPWF 

       130        140        150        160        170        180 
QRARQSPAGS PERDFYVWSD TDQKFPETRI IFIDTEKSNW TWDAVAGAYY WHRFYSHQPD 

       190        200        210        220        230        240 
LNFDSPLVME ELLRVMRFWL ETGIDGFRLD AIPYLVEREG TINENLPETH AILKRIRAAL 

       250        260        270        280        290        300 
DATHPGVMLL AEANQWPEDT REYFGDGDEC HMAFHFPLMP RMYMAIAKED RFPITDILRQ 

       310        320        330        340        350        360 
TPEIPDNCQW AIFLRNHDEL TLEMVTDAER DYLWETYASD KRARINLGIR RRLAPLMERD 

       370        380        390        400        410        420 
RRRIELMNAL LLSMPGTPVI YYGDEIGMGD NIYLGDRDGV RTPMQWSPDR NGGFSRADPA 

       430        440        450        460        470        480 
RLVLPPVADP LYGFEAVNVE AQSTDAHSLL NWTRRMLALR GRHPAFGRGT LRFLSPENRK 

       490        500        510        520        530        540 
ILAYLREYEG EVLLCVASLS RLPQAVELDL SSFEGRVPIE LTGMSPFPPI GQLTYLLTLP 

       550        560        570        580        590        600 
PYGFFWFQLT ADADPPAWRT APPEQLPDLL TMVIRRSLLD LVDEPGHARI LSGEILPAYL 

       610        620        630        640        650        660 
SRRRWFGAKD QPLQAARLVS ATPIPFADGV VLGELEVVLP NHSESYQLPL TVAWDDAHPS 

       670        680        690        700        710        720 
ALAQQLALGR IRQGRRVGFL TDGFAVEAMA RGILHGLRDR SRTTGRTGTL EFLGTEQLDS 

       730        740        750        760        770        780 
LDISDELPVH WLSAEQSNSS LLVGDVAMIK LIRHIFPGIH PEVEMTRYLT RAGYDHTAPL 

       790        800        810        820        830        840 
LGEVAHTDSS GRRSTLIIVQ GAIRNQGDAW NWMLNNLRRG ADELVLNDPA VQPDDDVFQS 

       850        860        870        880        890        900 
LISFVAMVGL RLGELHVVLA AKTGDEAFSP VVSGDKEVEA MKKAVSGEVA YAMSKLDERE 

       910        920        930        940        950        960 
QNADPAIDLL AAPLLERRSE LAELAGTLAE SCRHTLMTRT HGDFHLGQIL VSEGDAVIID 

       970        980        990       1000       1010       1020 
FEGEPAKNLT ERRAKTNPLR DVAGLLRSLS YLVATAQLDN DAVIEHDNEV RRKAIARFGR 

      1030       1040       1050       1060       1070       1080 
NAEEAFLDAY WQAVSVSKEL DMPPDQRRRV LDAFLLEKAA YEIAYEARNR PKWLPIPLSG 

      1090 
LTEIVSRLAG VTA 

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References

[1]"Complete genome sequence of Rhizobium leguminosarum bv. trifolii strain WSM1325, an effective microsymbiont of annual Mediterranean clovers."
Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K., Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M., Ovchinikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N., Melino V. expand/collapse author list , Denton M., Yates R., Howieson J.
Stand. Genomic Sci. 2:347-356(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WSM1325 EMBL ACS59311.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001623 Genomic DNA. Translation: ACS59311.1.
RefSeqYP_002973272.1. NC_012848.1.

3D structure databases

ProteinModelPortalC6B5F3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395491.Rleg_5098.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS59311; ACS59311; Rleg_5098.
GeneID8007690.
KEGGrlg:Rleg_5098.
PATRIC23106725. VBIRhiLeg48398_0453.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMAGTRIIFT.
OrthoDBEOG6RVFV2.

Enzyme and pathway databases

BioCycRLEG395491:GHX2-5160-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6B5F3_RHILS
AccessionPrimary (citable) accession number: C6B5F3
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)