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Protein

Glycine--tRNA ligase alpha subunit

Gene

glyQ

Organism
Rhizobium leguminosarum bv. trifolii (strain WSM1325)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetaseUniRule annotationSAAS annotation, Ligase

Keywords - Biological processi

Protein biosynthesisUniRule annotationSAAS annotation

Keywords - Ligandi

ATP-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciRLEG395491:GHX2-580-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycine--tRNA ligase alpha subunitUniRule annotationSAAS annotation (EC:6.1.1.14UniRule annotationSAAS annotation)
Alternative name(s):
Glycyl-tRNA synthetase alpha subunitUniRule annotation
Gene namesi
Name:glyQUniRule annotation
Ordered Locus Names:Rleg_0573Imported
OrganismiRhizobium leguminosarum bv. trifolii (strain WSM1325)Imported
Taxonomic identifieri395491 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000002256 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Tetramer of two alpha and two beta subunits.UniRule annotationSAAS annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the class-II aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0752.
HOGENOMiHOG000264291.
KOiK01878.
OMAiLGSYYQF.
OrthoDBiEOG661H9S.

Family and domain databases

HAMAPiMF_00254. Gly_tRNA_synth_alpha.
InterProiIPR006194. Gly-tRNA-synth_heterodimer.
IPR002310. Gly-tRNA_ligase_asu.
[Graphical view]
PfamiPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSiPR01044. TRNASYNTHGA.
TIGRFAMsiTIGR00388. glyQ. 1 hit.
PROSITEiPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6B2Q7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNPKRSFQAL ILTLHNYWAD KGCAVLQPYD MEVGAGTFHP ATTLRALGPK
60 70 80 90 100
PWKAAYVQPS RRPSDGRYGE NPNRLQHYYQ YQVILKPNPP NLQELYLGSL
110 120 130 140 150
AAIGLDPLLH DIRFVEDDWE SPTLGAWGLG WECWCDGMEV SQFTYFQQVC
160 170 180 190 200
GIECSPVAGE LTYGLERLAM YVQGVDNVYD LNFNGRDGDE KISYGDVFLQ
210 220 230 240 250
AEQEYSRHNF EFANTEMLHR HFVDAEKECR ALLDAGAPGD NANQRLHKCV
260 270 280 290 300
FPAYDQCIKA SHVFNLLDAR GVISVTERQS YILRVRTLAK ACGEAFLLTD
310
AGGVNLSKEA A
Length:311
Mass (Da):34,995
Last modified:September 1, 2009 - v1
Checksum:iCCDDD035C78A8255
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001622 Genomic DNA. Translation: ACS54877.1.
RefSeqiWP_003545877.1. NC_012850.1.

Genome annotation databases

EnsemblBacteriaiACS54877; ACS54877; Rleg_0573.
KEGGirlg:Rleg_0573.
PATRICi23108522. VBIRhiLeg48398_1343.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001622 Genomic DNA. Translation: ACS54877.1.
RefSeqiWP_003545877.1. NC_012850.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACS54877; ACS54877; Rleg_0573.
KEGGirlg:Rleg_0573.
PATRICi23108522. VBIRhiLeg48398_1343.

Phylogenomic databases

eggNOGiCOG0752.
HOGENOMiHOG000264291.
KOiK01878.
OMAiLGSYYQF.
OrthoDBiEOG661H9S.

Enzyme and pathway databases

BioCyciRLEG395491:GHX2-580-MONOMER.

Family and domain databases

HAMAPiMF_00254. Gly_tRNA_synth_alpha.
InterProiIPR006194. Gly-tRNA-synth_heterodimer.
IPR002310. Gly-tRNA_ligase_asu.
[Graphical view]
PfamiPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSiPR01044. TRNASYNTHGA.
TIGRFAMsiTIGR00388. glyQ. 1 hit.
PROSITEiPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Rhizobium leguminosarum bv. trifolii strain WSM1325, an effective microsymbiont of annual Mediterranean clovers."
    Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K., Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M., Ovchinikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N., Melino V.
    , Denton M., Yates R., Howieson J.
    Stand. Genomic Sci. 2:347-356(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WSM1325Imported.

Entry informationi

Entry nameiC6B2Q7_RHILS
AccessioniPrimary (citable) accession number: C6B2Q7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: July 22, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.