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C6AZI8

- C6AZI8_RHILS

UniProt

C6AZI8 - C6AZI8_RHILS

Protein
Submitted name:

Alpha amylase catalytic region

Gene

Rleg_2115

Organism
Rhizobium leguminosarum bv. trifolii (strain WSM1325)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 35 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciRLEG395491:GHX2-2144-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported
    Gene namesi
    Ordered Locus Names:Rleg_2115Imported
    OrganismiRhizobium leguminosarum bv. trifolii (strain WSM1325)Imported
    Taxonomic identifieri395491 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
    ProteomesiUP000002256: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi395491.Rleg_2115.

    Structurei

    3D structure databases

    ProteinModelPortaliC6AZI8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000220639.
    KOiK05343.
    OMAiQWSTEPH.
    OrthoDBiEOG6RVFV2.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProiIPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    C6AZI8-1 [UniParc]FASTAAdd to Basket

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    MINDLWYKNA VIYCLSVETF MDANGDGVGD FQGLMRRLDY LSGLGVTAIW    50
    LMPFQASPGR DDGYDVSDYY NVDPRYGSLG DFVEFTHGAK QRGIRVLIDL 100
    VINHTSKDHP WFQDARSDPR SRYRDWYVWS ERKPDNADQG MVFPGVQKTT 150
    WTYDDRAKAY YFHRFYDHQP DLNTSNPEVQ AEILKIMGFW IQLGVSGFRM 200
    DAAPFIIATK GADVTKPVEQ FDMLRKFREF LQWRLGDSII LAEANILPKD 250
    NFEYFGDDGD RMQMMFNFQV NQALFYAFAS ADTRPLKKAM EATKPRPATA 300
    QWGLFLRNHD ELDLGRLTEK QRAAVFAAFG PEKDMQLYDR GIRRRLAPML 350
    GGDHRRIEMA YSLLFSLPGT PVIRYGDEIG MGDDLGLPER NCARTPMQWS 400
    TEPEGGFTKS EKPISPVIKD GPYGFQHVNV AEQRRDPNSL LNWTERMIRM 450
    RKEAPEIGWG DFSVIDTGDD GVLALRYDWR GNSVLILHNL HAQPAEVTFD 500
    PEIGEDGRQL IDIADGASSK ADEKGFHTVM LDAYGYRWYR VGGLDYLLRR 550
    TEI 553
    Length:553
    Mass (Da):63,452
    Last modified:September 1, 2009 - v1
    Checksum:i0559A2D9D9D7D716
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001622 Genomic DNA. Translation: ACS56392.1.
    RefSeqiYP_002975931.1. NC_012850.1.

    Genome annotation databases

    EnsemblBacteriaiACS56392; ACS56392; Rleg_2115.
    GeneIDi8013138.
    KEGGirlg:Rleg_2115.
    PATRICi23111648. VBIRhiLeg48398_2882.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001622 Genomic DNA. Translation: ACS56392.1 .
    RefSeqi YP_002975931.1. NC_012850.1.

    3D structure databases

    ProteinModelPortali C6AZI8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 395491.Rleg_2115.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACS56392 ; ACS56392 ; Rleg_2115 .
    GeneIDi 8013138.
    KEGGi rlg:Rleg_2115.
    PATRICi 23111648. VBIRhiLeg48398_2882.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000220639.
    KOi K05343.
    OMAi QWSTEPH.
    OrthoDBi EOG6RVFV2.

    Enzyme and pathway databases

    BioCyci RLEG395491:GHX2-2144-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProi IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Rhizobium leguminosarum bv. trifolii strain WSM1325, an effective microsymbiont of annual Mediterranean clovers."
      Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K., Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M., Ovchinikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N., Melino V.
      , Denton M., Yates R., Howieson J.
      Stand. Genomic Sci. 2:347-356(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: WSM1325Imported.

    Entry informationi

    Entry nameiC6AZI8_RHILS
    AccessioniPrimary (citable) accession number: C6AZI8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3