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C6AZI8

- C6AZI8_RHILS

UniProt

C6AZI8 - C6AZI8_RHILS

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Protein
Submitted name: Alpha amylase catalytic region
Gene
Rleg_2115
Organism
Rhizobium leguminosarum bv. trifolii (strain WSM1325)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciRLEG395491:GHX2-2144-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Rleg_2115Imported
OrganismiRhizobium leguminosarum bv. trifolii (strain WSM1325)Imported
Taxonomic identifieri395491 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000002256: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi395491.Rleg_2115.

Structurei

3D structure databases

ProteinModelPortaliC6AZI8.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000220639.
KOiK05343.
OMAiQWSTEPH.
OrthoDBiEOG6RVFV2.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

C6AZI8-1 [UniParc]FASTAAdd to Basket

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MINDLWYKNA VIYCLSVETF MDANGDGVGD FQGLMRRLDY LSGLGVTAIW    50
LMPFQASPGR DDGYDVSDYY NVDPRYGSLG DFVEFTHGAK QRGIRVLIDL 100
VINHTSKDHP WFQDARSDPR SRYRDWYVWS ERKPDNADQG MVFPGVQKTT 150
WTYDDRAKAY YFHRFYDHQP DLNTSNPEVQ AEILKIMGFW IQLGVSGFRM 200
DAAPFIIATK GADVTKPVEQ FDMLRKFREF LQWRLGDSII LAEANILPKD 250
NFEYFGDDGD RMQMMFNFQV NQALFYAFAS ADTRPLKKAM EATKPRPATA 300
QWGLFLRNHD ELDLGRLTEK QRAAVFAAFG PEKDMQLYDR GIRRRLAPML 350
GGDHRRIEMA YSLLFSLPGT PVIRYGDEIG MGDDLGLPER NCARTPMQWS 400
TEPEGGFTKS EKPISPVIKD GPYGFQHVNV AEQRRDPNSL LNWTERMIRM 450
RKEAPEIGWG DFSVIDTGDD GVLALRYDWR GNSVLILHNL HAQPAEVTFD 500
PEIGEDGRQL IDIADGASSK ADEKGFHTVM LDAYGYRWYR VGGLDYLLRR 550
TEI 553
Length:553
Mass (Da):63,452
Last modified:September 1, 2009 - v1
Checksum:i0559A2D9D9D7D716
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001622 Genomic DNA. Translation: ACS56392.1.
RefSeqiYP_002975931.1. NC_012850.1.

Genome annotation databases

EnsemblBacteriaiACS56392; ACS56392; Rleg_2115.
GeneIDi8013138.
KEGGirlg:Rleg_2115.
PATRICi23111648. VBIRhiLeg48398_2882.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001622 Genomic DNA. Translation: ACS56392.1 .
RefSeqi YP_002975931.1. NC_012850.1.

3D structure databases

ProteinModelPortali C6AZI8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 395491.Rleg_2115.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACS56392 ; ACS56392 ; Rleg_2115 .
GeneIDi 8013138.
KEGGi rlg:Rleg_2115.
PATRICi 23111648. VBIRhiLeg48398_2882.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000220639.
KOi K05343.
OMAi QWSTEPH.
OrthoDBi EOG6RVFV2.

Enzyme and pathway databases

BioCyci RLEG395491:GHX2-2144-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Rhizobium leguminosarum bv. trifolii strain WSM1325, an effective microsymbiont of annual Mediterranean clovers."
    Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K., Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M., Ovchinikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N., Melino V.
    , Denton M., Yates R., Howieson J.
    Stand. Genomic Sci. 2:347-356(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WSM1325Imported.

Entry informationi

Entry nameiC6AZI8_RHILS
AccessioniPrimary (citable) accession number: C6AZI8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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