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C6AZD1 (C6AZD1_RHILS) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rleg_0146 EMBL ACS54457.1
OrganismRhizobium leguminosarum bv. trifolii (strain WSM1325) [Complete proteome] [HAMAP] EMBL ACS54457.1
Taxonomic identifier395491 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Protein attributes

Sequence length817 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ACS54457.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processmannan catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-mannosidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6AZD1 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 1664937373579A98

FASTA81791,967
        10         20         30         40         50         60 
MIEKTALNSG WTLSCNDTVR LGLPAAIPAT VPGCVHLDLL ANRLIPDPYI DVNEITNDWI 

        70         80         90        100        110        120 
GKTDWTYRCS FEAMPDDARV QELVFDGLDT VAVISLNGEE IGCTFNMHRT YRFDVSRLLK 

       130        140        150        160        170        180 
AGQNELTVTF RSAYAYGAEM EKHYGYRPNN YPGPGNLMRK MACNFGWDWG PTLVTAGLWK 

       190        200        210        220        230        240 
PVRLESWDRA RLAETRVSAI LSGGDGLVKV HARLARHGDK TPLRLVAEIG GVSKTVAIAP 

       250        260        270        280        290        300 
DEDAVSFELA LPSPQLWWPH HLGAQPLYPM TLRLFDEASD DLLDSYQREL GFRSLRLDTA 

       310        320        330        340        350        360 
ADDHGSAFTF IINDVPLFIC GANWIPDDCF PPRLTAERYA ARIEEAKAAN IHMLRVWGGG 

       370        380        390        400        410        420 
IFEADEFYET CDRKGMLVWQ DFLFACAAYP EEEPLRSEVE AEVRDNVVRL MPHASLVLWN 

       430        440        450        460        470        480 
GNNENIWGFD EWGWRPIIKA GESWGLGYYL DLLPKLCAEL DPDRPYYPGS PYSGSMEIEP 

       490        500        510        520        530        540 
NANGHGCKHI WDVWNDVGYE VYRNYIPRFC SEFGWQAPAA WATIEESVHD APLTPQSNGV 

       550        560        570        580        590        600 
FHHQKATEGN DKLIRGLSGH LPEPKTMDDW HFATQLNQAR AIRFGVEHMR SHRNICKGSV 

       610        620        630        640        650        660 
VWQFNDCWPV TSWAALDSAG RRKPLWYALK TAYDPRLLTI QPRGGGLAAV AVNERTLFWR 

       670        680        690        700        710        720 
AKISGKRLKL DGTVLAEFEF WRLLCDRFEA KEFPLPEEIV TPDLPKDEVI VVQMLDRRAF 

       730        740        750        760        770        780 
HYFVEDIELA LPAPRLTVDV TSIEGGYGVK VTAQNFLKDL CLMADRLDPD AVVDSMLVTL 

       790        800        810 
LPGESHVFVV KTTKAIGADD IVFGTVLRSA NDLTAGR 

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References

[1]"Complete genome sequence of Rhizobium leguminosarum bv. trifolii strain WSM1325, an effective microsymbiont of annual Mediterranean clovers."
Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K., Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M., Ovchinikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N., Melino V. expand/collapse author list , Denton M., Yates R., Howieson J.
Stand. Genomic Sci. 2:347-356(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WSM1325 EMBL ACS54457.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001622 Genomic DNA. Translation: ACS54457.1.
RefSeqYP_002973996.1. NC_012850.1.

3D structure databases

ProteinModelPortalC6AZD1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395491.Rleg_0146.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS54457; ACS54457; Rleg_0146.
GeneID8011380.
KEGGrlg:Rleg_0146.
PATRIC23107658. VBIRhiLeg48398_0918.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3250.
HOGENOMHOG000186861.
KOK01192.
OMASWGLGYY.
OrthoDBEOG6VHZ94.

Enzyme and pathway databases

BioCycRLEG395491:GHX2-147-MONOMER.

Family and domain databases

Gene3D2.60.120.260. 1 hit.
2.60.40.320. 1 hit.
3.20.20.80. 2 hits.
InterProIPR008979. Galactose-bd-like.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR028369. Mannanase.
[Graphical view]
PANTHERPTHR10066:SF12. PTHR10066:SF12. 1 hit.
PfamPF00703. Glyco_hydro_2. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
SUPFAMSSF49303. SSF49303. 1 hit.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6AZD1_RHILS
AccessionPrimary (citable) accession number: C6AZD1
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)