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Protein
Submitted name:

Glycoside hydrolase family 2 sugar binding

Gene

Rleg_0146

Organism
Rhizobium leguminosarum bv. trifolii (strain WSM1325)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. beta-mannosidase activity Source: InterPro

GO - Biological processi

  1. mannan catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciRLEG395491:GHX2-147-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase family 2 sugar bindingImported
Gene namesi
Ordered Locus Names:Rleg_0146Imported
OrganismiRhizobium leguminosarum bv. trifolii (strain WSM1325)Imported
Taxonomic identifieri395491 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000002256 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi395491.Rleg_0146.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3250.
HOGENOMiHOG000186861.
KOiK01192.
OMAiCKHIWDV.
OrthoDBiEOG6VHZ94.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
2.60.40.320. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR008979. Galactose-bd-like.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR028369. Mannanase.
[Graphical view]
PANTHERiPTHR10066:SF12. PTHR10066:SF12. 1 hit.
PfamiPF00703. Glyco_hydro_2. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
SUPFAMiSSF49303. SSF49303. 1 hit.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

C6AZD1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIEKTALNSG WTLSCNDTVR LGLPAAIPAT VPGCVHLDLL ANRLIPDPYI
60 70 80 90 100
DVNEITNDWI GKTDWTYRCS FEAMPDDARV QELVFDGLDT VAVISLNGEE
110 120 130 140 150
IGCTFNMHRT YRFDVSRLLK AGQNELTVTF RSAYAYGAEM EKHYGYRPNN
160 170 180 190 200
YPGPGNLMRK MACNFGWDWG PTLVTAGLWK PVRLESWDRA RLAETRVSAI
210 220 230 240 250
LSGGDGLVKV HARLARHGDK TPLRLVAEIG GVSKTVAIAP DEDAVSFELA
260 270 280 290 300
LPSPQLWWPH HLGAQPLYPM TLRLFDEASD DLLDSYQREL GFRSLRLDTA
310 320 330 340 350
ADDHGSAFTF IINDVPLFIC GANWIPDDCF PPRLTAERYA ARIEEAKAAN
360 370 380 390 400
IHMLRVWGGG IFEADEFYET CDRKGMLVWQ DFLFACAAYP EEEPLRSEVE
410 420 430 440 450
AEVRDNVVRL MPHASLVLWN GNNENIWGFD EWGWRPIIKA GESWGLGYYL
460 470 480 490 500
DLLPKLCAEL DPDRPYYPGS PYSGSMEIEP NANGHGCKHI WDVWNDVGYE
510 520 530 540 550
VYRNYIPRFC SEFGWQAPAA WATIEESVHD APLTPQSNGV FHHQKATEGN
560 570 580 590 600
DKLIRGLSGH LPEPKTMDDW HFATQLNQAR AIRFGVEHMR SHRNICKGSV
610 620 630 640 650
VWQFNDCWPV TSWAALDSAG RRKPLWYALK TAYDPRLLTI QPRGGGLAAV
660 670 680 690 700
AVNERTLFWR AKISGKRLKL DGTVLAEFEF WRLLCDRFEA KEFPLPEEIV
710 720 730 740 750
TPDLPKDEVI VVQMLDRRAF HYFVEDIELA LPAPRLTVDV TSIEGGYGVK
760 770 780 790 800
VTAQNFLKDL CLMADRLDPD AVVDSMLVTL LPGESHVFVV KTTKAIGADD
810
IVFGTVLRSA NDLTAGR
Length:817
Mass (Da):91,967
Last modified:August 31, 2009 - v1
Checksum:i1664937373579A98
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001622 Genomic DNA. Translation: ACS54457.1.
RefSeqiYP_002973996.1. NC_012850.1.

Genome annotation databases

EnsemblBacteriaiACS54457; ACS54457; Rleg_0146.
KEGGirlg:Rleg_0146.
PATRICi23107658. VBIRhiLeg48398_0918.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001622 Genomic DNA. Translation: ACS54457.1.
RefSeqiYP_002973996.1. NC_012850.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395491.Rleg_0146.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACS54457; ACS54457; Rleg_0146.
KEGGirlg:Rleg_0146.
PATRICi23107658. VBIRhiLeg48398_0918.

Phylogenomic databases

eggNOGiCOG3250.
HOGENOMiHOG000186861.
KOiK01192.
OMAiCKHIWDV.
OrthoDBiEOG6VHZ94.

Enzyme and pathway databases

BioCyciRLEG395491:GHX2-147-MONOMER.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
2.60.40.320. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR008979. Galactose-bd-like.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR028369. Mannanase.
[Graphical view]
PANTHERiPTHR10066:SF12. PTHR10066:SF12. 1 hit.
PfamiPF00703. Glyco_hydro_2. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
SUPFAMiSSF49303. SSF49303. 1 hit.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Rhizobium leguminosarum bv. trifolii strain WSM1325, an effective microsymbiont of annual Mediterranean clovers."
    Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K., Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M., Ovchinikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N., Melino V.
    , Denton M., Yates R., Howieson J.
    Stand. Genomic Sci. 2:347-356(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WSM1325Imported.

Entry informationi

Entry nameiC6AZD1_RHILS
AccessioniPrimary (citable) accession number: C6AZD1
Entry historyi
Integrated into UniProtKB/TrEMBL: August 31, 2009
Last sequence update: August 31, 2009
Last modified: March 31, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.