C6AW73 (C6AW73_RHILS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Deoxyribodipyrimidine photo-lyase EMBL ACS55911.1
EC=4.1.99.3 EMBL ACS55911.1

Gene names

Ordered Locus Names:

Rleg_1623 EMBL ACS55911.1

Organism

Rhizobium leguminosarum bv. trifolii (strain WSM1325) [Complete proteome] [HAMAP] EMBL ACS55911.1

Taxonomic identifier

395491 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium › Rhizobium leguminosarum › Rhizobium leguminosarum bv. trifolii

Protein attributes

Sequence length	482 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the DNA photolyase class-1 family. RuleBase RU004182

Ontologies

Keywords
Ligand	Chromophore RuleBase RU004291 FAD RuleBase RU004291 Flavoprotein RuleBase RU004291
Molecular function	Lyase EMBL ACS55911.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA repair Inferred from electronic annotation. Source: InterPro protein-chromophore linkage Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	deoxyribodipyrimidine photo-lyase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6AW73 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 253E1DE45462C8A3	FASTA	482	54,489
	10 20 30 40 50 60 MAKDAAKPVI LWFRKDLRLD DNQALTAAHR SGRPIIPLYI REPAAAGTGP LGAAQAWWLH 70 80 90 100 110 120 HSLEALNRSL QKLNGRLVLA SGEALEVLCA FIKESAAEAV FWNRRYDPAG ISIDARIKHE 130 140 150 160 170 180 LEKQAIEARS FGGQLLHEPS RLMTGNGTPY RVYTPFWRAL EGGGEPEPPL DAPAKLRLAS 190 200 210 220 230 240 QPKSEVLGSW KLLPTKPDWA GDFVDLWTPG EEGAQQRLHV FVEDALEGYK ENRDYPARPA 250 260 270 280 290 300 TSMLSPHLAL GEISPARIWD ATRGLSQRVP AADIVHFREE IAWREFSYHL LFHFPRLASA 310 320 330 340 350 360 NWNDRFDGFE WRNNSGDFEA WRRGMTGYPI VDAGMRQLWR HGWMHNRVRM IVASFLIKDL 370 380 390 400 410 420 MIDWRRGEAW FRDTLVDADP ANNAASWQWV AGSGADASPF FRIFNPVLQG EKFDPDGDYV 430 440 450 460 470 480 RTYVPELREL GPKYIHRPFE APKSMLDEAG ITLGQTYPKP IVDHASARNR ALAAYKAIRD AA

References

[1]

"Complete genome sequence of Rhizobium leguminosarum bv. trifolii strain WSM1325, an effective microsymbiont of annual Mediterranean clovers." Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K., Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M., Ovchinnikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N., Melino V. , Denton M., Yates R., Howieson J. Stand. Genomic Sci. 2:347-356(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WSM1325.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001622 Genomic DNA. Translation: ACS55911.1.
RefSeq	YP_002975450.1. NC_012850.1.
3D structure databases
ProteinModelPortal	C6AW73.
ModBase	Search...
Protein-protein interaction databases
STRING	395491.Rleg_1623.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACS55911; ACS55911; Rleg_1623.
GeneID	8012695.
KEGG	rlg:Rleg_1623.
PATRIC	23110640. VBIRhiLeg48398_2390.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0415.
HOGENOM	HOG000245621.
KO	K01669.
OMA	CKVDFWL.
ProtClustDB	CLSK544420.
Enzyme and pathway databases
BioCyc	RLEG395491:GHX2-3464-MONOMER.
Family and domain databases
Gene3D	3.40.50.620. 1 hit.
InterPro	IPR002081. Cryptochrome/DNA_photolyase_1. IPR018394. DNA_photolyase_1_CS_C. IPR006050. DNA_photolyase_N. IPR005101. Photolyase_FAD-bd/Cryptochr_C. IPR014729. Rossmann-like_a/b/a_fold. [Graphical view]
Pfam	PF00875. DNA_photolyase. 1 hit. PF03441. FAD_binding_7. 1 hit. [Graphical view]
PRINTS	PR00147. DNAPHOTLYASE.
SUPFAM	SSF52425. DNA_photolyase_N. 1 hit. SSF48173. Photolyase_FAD-bd/Cryptochr_C. 1 hit.
PROSITE	PS00394. DNA_PHOTOLYASES_1_1. 1 hit. PS00691. DNA_PHOTOLYASES_1_2. 1 hit. PS51645. PHR_CRY_ALPHA_BETA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C6AW73_RHILS

Accession

Primary (citable) accession number: C6AW73

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)