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C6AS36

- C6AS36_RHILS

UniProt

C6AS36 - C6AS36_RHILS

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Rleg_0915

Organism
Rhizobium leguminosarum bv. trifolii (strain WSM1325)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciRLEG395491:GHX2-923-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Rleg_0915Imported
    OrganismiRhizobium leguminosarum bv. trifolii (strain WSM1325)Imported
    Taxonomic identifieri395491 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
    ProteomesiUP000002256: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi395491.Rleg_0915.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiNRHKSGV.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C6AS36-1 [UniParc]FASTAAdd to Basket

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    MKAFADLLDR LVLTPSRNGK LKLLTDYFRD TPDPDRGYGL AAIAGTLEVR    50
    NVKPAMLREL VLERMDEVLF RYSYDYVGDL AETISLVWDN ERDIDRSALA 100
    QPRLGEVVTG MNALGRTEVR SYVRDLLDRL DSSGRFAFIK LATGAMRIGV 150
    SARLAKQALA DLGDKDVAEI ETLWHGLQPP YETLFEWLAD GGEKPVLATP 200
    AIFHSVMLAN AVEEGDLTSL DPVNYAAEWK WDGIRVQLSR SGDRRKIYSR 250
    SGDDISGAFP DILDAINFSG VVDGELLVGG TARSNSPTRT FSDLQQRLNR 300
    KTVTAKMLGD YPAFIRTYDL LFDGDDDVRG RTYVDRRDRL TEIIDRAPHD 350
    RFDLSPLVPF SSWEELDTLR AAPPDPVIEG VMIKRRDSIY QAGRMKGPWF 400
    KWKRNPYNVD AVLMYAQRGH GKRSSYYSDF TFGVWADDED GEQLVPVGKA 450
    YFGFTDAELE VLDKFVRNNT TERFGPVRAV RADKDFGFVV EVAFEGINRS 500
    TRHKSGVAMR FPRIARLRPD KPSYEADRLR TLIAMIEAKP A 541
    Length:541
    Mass (Da):61,091
    Last modified:September 1, 2009 - v1
    Checksum:i43433418CA5D4ECB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001622 Genomic DNA. Translation: ACS55211.1.
    RefSeqiYP_002974750.1. NC_012850.1.

    Genome annotation databases

    EnsemblBacteriaiACS55211; ACS55211; Rleg_0915.
    GeneIDi8012062.
    KEGGirlg:Rleg_0915.
    PATRICi23109192. VBIRhiLeg48398_1676.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001622 Genomic DNA. Translation: ACS55211.1 .
    RefSeqi YP_002974750.1. NC_012850.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 395491.Rleg_0915.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACS55211 ; ACS55211 ; Rleg_0915 .
    GeneIDi 8012062.
    KEGGi rlg:Rleg_0915.
    PATRICi 23109192. VBIRhiLeg48398_1676.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi NRHKSGV.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci RLEG395491:GHX2-923-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Rhizobium leguminosarum bv. trifolii strain WSM1325, an effective microsymbiont of annual Mediterranean clovers."
      Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K., Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M., Ovchinikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N., Melino V.
      , Denton M., Yates R., Howieson J.
      Stand. Genomic Sci. 2:347-356(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: WSM1325Imported.

    Entry informationi

    Entry nameiC6AS36_RHILS
    AccessioniPrimary (citable) accession number: C6AS36
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3