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C6AS36

- C6AS36_RHILS

UniProt

C6AS36 - C6AS36_RHILS

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Rleg_0915
Organism
Rhizobium leguminosarum bv. trifolii (strain WSM1325)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRLEG395491:GHX2-923-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Rleg_0915Imported
OrganismiRhizobium leguminosarum bv. trifolii (strain WSM1325)Imported
Taxonomic identifieri395491 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000002256: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi395491.Rleg_0915.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiNRHKSGV.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6AS36-1 [UniParc]FASTAAdd to Basket

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MKAFADLLDR LVLTPSRNGK LKLLTDYFRD TPDPDRGYGL AAIAGTLEVR    50
NVKPAMLREL VLERMDEVLF RYSYDYVGDL AETISLVWDN ERDIDRSALA 100
QPRLGEVVTG MNALGRTEVR SYVRDLLDRL DSSGRFAFIK LATGAMRIGV 150
SARLAKQALA DLGDKDVAEI ETLWHGLQPP YETLFEWLAD GGEKPVLATP 200
AIFHSVMLAN AVEEGDLTSL DPVNYAAEWK WDGIRVQLSR SGDRRKIYSR 250
SGDDISGAFP DILDAINFSG VVDGELLVGG TARSNSPTRT FSDLQQRLNR 300
KTVTAKMLGD YPAFIRTYDL LFDGDDDVRG RTYVDRRDRL TEIIDRAPHD 350
RFDLSPLVPF SSWEELDTLR AAPPDPVIEG VMIKRRDSIY QAGRMKGPWF 400
KWKRNPYNVD AVLMYAQRGH GKRSSYYSDF TFGVWADDED GEQLVPVGKA 450
YFGFTDAELE VLDKFVRNNT TERFGPVRAV RADKDFGFVV EVAFEGINRS 500
TRHKSGVAMR FPRIARLRPD KPSYEADRLR TLIAMIEAKP A 541
Length:541
Mass (Da):61,091
Last modified:September 1, 2009 - v1
Checksum:i43433418CA5D4ECB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001622 Genomic DNA. Translation: ACS55211.1.
RefSeqiYP_002974750.1. NC_012850.1.

Genome annotation databases

EnsemblBacteriaiACS55211; ACS55211; Rleg_0915.
GeneIDi8012062.
KEGGirlg:Rleg_0915.
PATRICi23109192. VBIRhiLeg48398_1676.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001622 Genomic DNA. Translation: ACS55211.1 .
RefSeqi YP_002974750.1. NC_012850.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 395491.Rleg_0915.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACS55211 ; ACS55211 ; Rleg_0915 .
GeneIDi 8012062.
KEGGi rlg:Rleg_0915.
PATRICi 23109192. VBIRhiLeg48398_1676.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi NRHKSGV.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci RLEG395491:GHX2-923-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Rhizobium leguminosarum bv. trifolii strain WSM1325, an effective microsymbiont of annual Mediterranean clovers."
    Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K., Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M., Ovchinikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N., Melino V.
    , Denton M., Yates R., Howieson J.
    Stand. Genomic Sci. 2:347-356(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WSM1325Imported.

Entry informationi

Entry nameiC6AS36_RHILS
AccessioniPrimary (citable) accession number: C6AS36
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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