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C6AS12 (C6AS12_RHILS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Betaine aldehyde dehydrogenase HAMAP MF_00804
Short name=BADH HAMAP MF_00804
EC=1.2.1.8 HAMAP MF_00804
Gene names
Name:betB HAMAP MF_00804
Ordered Locus Names:Rleg_0890
OrganismRhizobium leguminosarum bv. trifolii (strain WSM1325) [Complete proteome] [HAMAP]
Taxonomic identifier395491 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length487 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding228 – 2336NAD By similarity HAMAP MF_00804

Sites

Active site2501 By similarity HAMAP MF_00804
Active site2841 By similarity HAMAP MF_00804

Sequences

Sequence LengthMass (Da)Tools
C6AS12 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: A852F5C2D95EC91B

FASTA48751,750
        10         20         30         40         50         60 
MKAQPKASHF IDGEYVEDTD GTVIESLYPA TGEVIARLHA ATPAIVERAI AAAKRAQPEW 

        70         80         90        100        110        120 
AAMSPMARGR ILKRAADIMR ERNRALSELE TLDTGKPIQE TVVADPTSGA DAFEFFGGIA 

       130        140        150        160        170        180 
PAGLNGSQIP LGQDFAYTKR VALGVCVGIG AWNYPQQIAC WKAAPALVCG NAMVFKPSEN 

       190        200        210        220        230        240 
TPLGALKIAE ILLEAGLPKG LFNVIQGDRD TGPLLVNHPD VAKVSLTGSV PTGRRVAAAA 

       250        260        270        280        290        300 
AGNLKHVTME LGGKSPLIVF DDADLDSAVG GAMLGNFYST GQVCSNGTRV FVQKTVKAEF 

       310        320        330        340        350        360 
LKRLKIRTEA MLIGDPMDEA TQVGPMVSWA QREKVISYIE KGKAEGATLI AGGGIPNNVS 

       370        380        390        400        410        420 
GEGYYVQPTV FADVTDDMTI AREEIFGPVM SVLDFDAEDE VIARANASEF GLSGGVFTAD 

       430        440        450        460        470        480 
LTRAHRVVDR LEAGTLWINT YNLCPVEIPF GGSKQSGYGR ENSLAALEHY SELKTVYVGM 


GPVAAPY

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References

[1]"Complete genome sequence of Rhizobium leguminosarum bv. trifolii strain WSM1325, an effective microsymbiont of annual Mediterranean clovers."
Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K., Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M., Ovchinnikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N., Melino V. expand/collapse author list , Denton M., Yates R., Howieson J.
Stand. Genomic Sci. 2:347-356(2010)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WSM1325.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001622 Genomic DNA. Translation: ACS55187.1.
RefSeqYP_002974726.1. NC_012850.1.

3D structure databases

ProteinModelPortalC6AS12.
ModBaseSearch...

Protein-protein interaction databases

STRINGC6AS12.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8012040.
GenomeReviewsGene locus Rleg_0890 in contig CP001622_GR.
KEGGrlg:Rleg_0890.
PATRIC23109140. VBIRhiLeg48398_1650.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAIMRERNR.
ProtClustDBPRK13252.

Family and domain databases

HAMAPMF_00804. BADH.
[Tree]
InterProIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
IPR011264. Betaine_Ald_DH.
[Graphical view]
Gene3DG3DSA:3.40.309.10. Aldehyde_dehydrogenase_C. 1 hit.
G3DSA:3.40.605.10. Aldehyde_dehydrogenase_N. 1 hit.
KOK00130.
PfamPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMSSF53720. Aldehyde_DH/Histidinol_DH. 1 hit.
TIGRFAMsTIGR01804. BADH. 1 hit.
PROSITEPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6AS12_RHILS
AccessionPrimary (citable) accession number: C6AS12
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info