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C6ANE3

- C6ANE3_AGGAN

UniProt

C6ANE3 - C6ANE3_AGGAN

Protein

tRNA pseudouridine synthase B

Gene

truB

Organism
Aggregatibacter aphrophilus (strain NJ8700) (Haemophilus aphrophilus)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.UniRule annotationSAAS annotation

    Catalytic activityi

    tRNA uridine(55) = tRNA pseudouridine(55).UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei48 – 481NucleophileUniRule annotation

    GO - Molecular functioni

    1. pseudouridine synthase activity Source: UniProtKB-HAMAP
    2. RNA binding Source: InterPro

    GO - Biological processi

    1. tRNA pseudouridine synthesis Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotation

    Keywords - Biological processi

    tRNA processingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciAAPH634176:GHVL-951-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    tRNA pseudouridine synthase BUniRule annotation (EC:5.4.99.25UniRule annotation)
    Alternative name(s):
    tRNA pseudouridine(55) synthaseUniRule annotation
    tRNA pseudouridylate synthaseUniRule annotation
    tRNA-uridine isomeraseUniRule annotation
    Gene namesi
    Name:truBUniRule annotation
    Ordered Locus Names:NT05HA_0980Imported
    OrganismiAggregatibacter aphrophilus (strain NJ8700) (Haemophilus aphrophilus)Imported
    Taxonomic identifieri634176 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeAggregatibacter
    ProteomesiUP000002733: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi634176.NT05HA_0980.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0130.
    HOGENOMiHOG000231223.
    KOiK03177.
    OMAiYELQFIR.
    OrthoDBiEOG6358D3.

    Family and domain databases

    Gene3Di2.30.130.10. 1 hit.
    HAMAPiMF_01080. TruB_bact.
    InterProiIPR002501. PsdUridine_synth.
    IPR020103. PsdUridine_synth_cat_dom.
    IPR015947. PUA-like_domain.
    IPR014780. tRNA_psdUridine_synth_TruB.
    IPR015240. tRNA_sdUridine_synth_fam1_C.
    [Graphical view]
    PANTHERiPTHR13767. PTHR13767. 1 hit.
    PfamiPF09157. TruB-C_2. 1 hit.
    PF01509. TruB_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF55120. SSF55120. 1 hit.
    SSF88697. SSF88697. 1 hit.
    TIGRFAMsiTIGR00431. TruB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6ANE3-1 [UniParc]FASTAAdd to Basket

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    MSKPRKRGRD IHGVFLLDKP QGMSSNDIMQ KVKRIFQANK AGHTGALDPL    50
    ATGMLPICLG EATKFSQFLL DADKRYLVTA KLGERTDTSD AEGQIVETRE 100
    VKVKTPEILT ALEQFRGDIL QVPTMFSALK HNGKPLYEYA RQGITVEREA 150
    RPITIFELNF IEYNAPYLTL EVHCSKGTYI RTLVDDLGEV LGCGAHVTML 200
    RRTAVADYPT EKMLDWNALQ SLAAQQDLAL LDALLLPMDT AVAKLPTLTL 250
    DESQAQGIGF GQRVKFNNPN SLQGQVRLFS HENRFLGVAV IDENNVIRPQ 300
    RLVVYE 306
    Length:306
    Mass (Da):34,171
    Last modified:September 1, 2009 - v1
    Checksum:iCEDA55C95C93A923
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001607 Genomic DNA. Translation: ACS97355.1.
    RefSeqiWP_005700692.1. NC_012913.1.
    YP_003007442.1. NC_012913.1.

    Genome annotation databases

    EnsemblBacteriaiACS97355; ACS97355; NT05HA_0980.
    GeneIDi8122946.
    KEGGiaap:NT05HA_0980.
    PATRICi31917028. VBIAggAph86045_0925.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001607 Genomic DNA. Translation: ACS97355.1 .
    RefSeqi WP_005700692.1. NC_012913.1.
    YP_003007442.1. NC_012913.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 634176.NT05HA_0980.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACS97355 ; ACS97355 ; NT05HA_0980 .
    GeneIDi 8122946.
    KEGGi aap:NT05HA_0980.
    PATRICi 31917028. VBIAggAph86045_0925.

    Phylogenomic databases

    eggNOGi COG0130.
    HOGENOMi HOG000231223.
    KOi K03177.
    OMAi YELQFIR.
    OrthoDBi EOG6358D3.

    Enzyme and pathway databases

    BioCyci AAPH634176:GHVL-951-MONOMER.

    Family and domain databases

    Gene3Di 2.30.130.10. 1 hit.
    HAMAPi MF_01080. TruB_bact.
    InterProi IPR002501. PsdUridine_synth.
    IPR020103. PsdUridine_synth_cat_dom.
    IPR015947. PUA-like_domain.
    IPR014780. tRNA_psdUridine_synth_TruB.
    IPR015240. tRNA_sdUridine_synth_fam1_C.
    [Graphical view ]
    PANTHERi PTHR13767. PTHR13767. 1 hit.
    Pfami PF09157. TruB-C_2. 1 hit.
    PF01509. TruB_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55120. SSF55120. 1 hit.
    SSF88697. SSF88697. 1 hit.
    TIGRFAMsi TIGR00431. TruB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Aggregatibacter (Haemophilus) aphrophilus NJ8700."
      Di Bonaventura M.P., DeSalle R., Pop M., Nagarajan N., Figurski D.H., Fine D.H., Kaplan J.B., Planet P.J.
      J. Bacteriol. 191:4693-4694(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NJ8700Imported.

    Entry informationi

    Entry nameiC6ANE3_AGGAN
    AccessioniPrimary (citable) accession number: C6ANE3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3