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Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Aggregatibacter aphrophilus (strain NJ8700) (Haemophilus aphrophilus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:malSImported
ORF Names:NJ8700_04305Imported
OrganismiAggregatibacter aphrophilus (strain NJ8700) (Haemophilus aphrophilus)Imported
Taxonomic identifieri634176 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeAggregatibacter

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini193 – 645453AamyInterPro annotationAdd
BLAST

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 4 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

C6AN88-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQKSLLYLSL FCATNAMATW QHPQFNTLSD SGEKQLFQGQ ATLDKGTYPL
60 70 80 90 100
QFQTDNQCFQ PQSAVKLNQT VSLEPCHGDA PQLRIFRNGN YLAQIDTRSG
110 120 130 140 150
TPTLRISIEQ QPESEAVAKT CPKWDKKPLE IDVSQTFSNG DTVRDAYSGK
160 170 180 190 200
SAVVKNGKVT FTPDPLTGGL LLLEKSAVKK PSVFNWKNAT VYFVLTDRFY
210 220 230 240 250
NGNPKNDNSY GRHKDGMQEI GTFHGGDLQG LTKKLDYLQQ LGINVLWISS
260 270 280 290 300
PLEQMHGWVG GGEKGDFPHY GYHGYYHQDW TKIDQNMGSE EDLKTLIDQA
310 320 330 340 350
HKRGIKVIFD VVMNHTGYAT LADMQEFGFG SLYLKPEEIN AVLGEKWTNW
360 370 380 390 400
TPKQGQNWHS FNDYINFGDK TGWTTWWGKD WVRSDIGDYD SPKFDDLKMS
410 420 430 440 450
LASLPDLKTE SESAVDLPPI FQHKQTNAKP LPNAKVRDYL IGWLSDWVRK
460 470 480 490 500
YGVDGFRVDT AKHVEKSTWL QLKQSAQAAL RQWQEKHPQE TQGDDFWMTG
510 520 530 540 550
EAWGHGVLKS DYYQNGFDAM INFDFQDQAK NALDCFAQIE DVYQDMNSKL
560 570 580 590 600
SDFNVLSYLS SHDTRLFFHS DSENNVAKQK TAANLLLLAP GAVQIYYGDE
610 620 630 640 650
SGRAFGPTGS DPMQGTRSDM NWQELTNNAE KQALLTHWQK LAHFRQAHPA
660 670 680
IGAGKQTTAK TEKYYAFSRE LDKDKVMVIW AGE
Length:683
Mass (Da):77,455
Last modified:September 1, 2009 - v1
Checksum:i209CE31FA53D7177
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009230 Genomic DNA. Translation: AKS64653.1.
RefSeqiWP_012771524.1. NZ_CP009230.1.

Genome annotation databases

EnsemblBacteriaiACS97297; ACS97297; NT05HA_0922.
KEGGiaap:NT05HA_0922.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009230 Genomic DNA. Translation: AKS64653.1.
RefSeqiWP_012771524.1. NZ_CP009230.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACS97297; ACS97297; NT05HA_0922.
KEGGiaap:NT05HA_0922.

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 4 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "DNA barcoding of Bradysia (Diptera: Sciaridae) for detection of the immature stages on agricultural crops."
    Shin S., Jung S., Heller K., Menzel F., Hong T.-K., Lee H., Lee S.
    Submitted (AUG-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NJ8700Imported.

Entry informationi

Entry nameiC6AN88_AGGAN
AccessioniPrimary (citable) accession number: C6AN88
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: December 9, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.