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Protein
Submitted name:

Geranyl transferase

Gene

NJ8700_03410

Organism
Aggregatibacter aphrophilus (strain NJ8700) (Haemophilus aphrophilus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

TransferaseUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
Geranyl transferaseImported
Gene namesi
ORF Names:NJ8700_03410Imported
OrganismiAggregatibacter aphrophilus (strain NJ8700) (Haemophilus aphrophilus)Imported
Taxonomic identifieri634176 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeAggregatibacter

Family & Domainsi

Sequence similaritiesi

Belongs to the FPP/GGPP synthase family.UniRule annotation

Phylogenomic databases

KOiK00795.

Family and domain databases

Gene3Di1.10.600.10. 1 hit.
InterProiIPR008949. Isoprenoid_synthase_dom.
IPR000092. Polyprenyl_synt.
IPR017446. Polyprenyl_synth-rel.
[Graphical view]
PANTHERiPTHR12001. PTHR12001. 1 hit.
PfamiPF00348. polyprenyl_synt. 1 hit.
[Graphical view]
SUPFAMiSSF48576. SSF48576. 1 hit.
PROSITEiPS00723. POLYPRENYL_SYNTHASE_1. 1 hit.
PS00444. POLYPRENYL_SYNTHASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6AMR2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYQFSLDLQQ VQQRINSFLA SQFEHINSSP APLVEAMKYG LLLGGKRIRP
60 70 80 90 100
FLVYATGRIL GANLAHLDYA AAAIEAIHAY SLIHDDLPAM DDDELRRGHK
110 120 130 140 150
TCHIAFDEAT AILAGDALQS FAFEILTDIP DLSAQQKLAL IKTLSAAAGV
160 170 180 190 200
KGMCLGQSLD LISEQKAISL TELEHIHLNK TGALLTAALK LGFICSPHFA
210 220 230 240 250
DEALLQQLER YATAIGLAFQ VQDDILDIEG NSETIGKPVG SDLNSDKSTY
260 270 280 290
PKLLGLAGAK QKAQELYETA LAELQNLPFD TTALYALAEF IIKRQN
Length:296
Mass (Da):32,223
Last modified:September 1, 2009 - v1
Checksum:iBE6D8292734DF35A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009230 Genomic DNA. Translation: AKS64481.1.
RefSeqiWP_005700419.1. NZ_CP009230.1.

Genome annotation databases

EnsemblBacteriaiACS97123; ACS97123; NT05HA_0728.
KEGGiaap:NT05HA_0728.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009230 Genomic DNA. Translation: AKS64481.1.
RefSeqiWP_005700419.1. NZ_CP009230.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACS97123; ACS97123; NT05HA_0728.
KEGGiaap:NT05HA_0728.

Phylogenomic databases

KOiK00795.

Family and domain databases

Gene3Di1.10.600.10. 1 hit.
InterProiIPR008949. Isoprenoid_synthase_dom.
IPR000092. Polyprenyl_synt.
IPR017446. Polyprenyl_synth-rel.
[Graphical view]
PANTHERiPTHR12001. PTHR12001. 1 hit.
PfamiPF00348. polyprenyl_synt. 1 hit.
[Graphical view]
SUPFAMiSSF48576. SSF48576. 1 hit.
PROSITEiPS00723. POLYPRENYL_SYNTHASE_1. 1 hit.
PS00444. POLYPRENYL_SYNTHASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "DNA barcoding of Bradysia (Diptera: Sciaridae) for detection of the immature stages on agricultural crops."
    Shin S., Jung S., Heller K., Menzel F., Hong T.-K., Lee H., Lee S.
    Submitted (AUG-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: NJ8700Imported.

Entry informationi

Entry nameiC6AMR2_AGGAN
AccessioniPrimary (citable) accession number: C6AMR2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: February 17, 2016
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.