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C6AM43 (C6AM43_AGGAN) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Lysozyme RuleBase RU003788
EC=3.2.1.17 RuleBase RU003788
Gene names
Ordered Locus Names:NT05HA_0490
OrganismAggregatibacter aphrophilus (strain NJ8700) (Haemophilus aphrophilus) [Complete proteome] [HAMAP] EMBL ACS96905.1
Taxonomic identifier634176 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pasteurellales › Pasteurellaceae › Aggregatibacter ›

Protein attributes

Sequence length175 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. RuleBase RU003788

Sequence similarities

Belongs to the glycosyl hydrolase 24 family. RuleBase RU003788

Sequences

Sequence LengthMass (Da)Tools
C6AM43 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 340322F2746C3880

FASTA17519,427
        10         20         30         40         50         60 
MLAKCSVVVI AGIILANYPD EIRTGEVGLL VIGNAEDCYR EPYKCPADVW TDGIGNTNDV 

        70         80         90        100        110        120 
VLGRKLSDEE IAERWKDNIK IAENCVNRWA NGKELSQGAF EAAVSITFNV GCSKLKQATL 

       130        140        150        160        170 
FKYARVGDIN LMCNQFPRWV YSQGKVLPGL VKRRNVEKAL CLGLIKSPEQ LSAYR

« Hide

References

[1]"Complete genome sequence of Aggregatibacter (Haemophilus) aphrophilus NJ8700."
Di Bonaventura M.P., DeSalle R., Pop M., Nagarajan N., Figurski D.H., Fine D.H., Kaplan J.B., Planet P.J.
J. Bacteriol. 191:4693-4694(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NJ8700.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001607 Genomic DNA. Translation: ACS96905.1.
RefSeqYP_003006992.1. NC_012913.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING634176.NT05HA_0490.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS96905; ACS96905; NT05HA_0490.
GeneID8121925.
KEGGaap:NT05HA_0490.
PATRIC31916079. VBIAggAph86045_0461.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000277068.
KOK01185.
OMAQSAFEAM.

Enzyme and pathway databases

BioCycAAPH634176:GHVL-481-MONOMER.

Family and domain databases

Gene3D1.10.530.40. 1 hit.
InterProIPR002196. Glyco_hydro_24.
IPR023346. Lysozyme-like_dom.
IPR023347. Lysozyme_dom.
[Graphical view]
PfamPF00959. Phage_lysozyme. 1 hit.
[Graphical view]
SUPFAMSSF53955. SSF53955. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6AM43_AGGAN
AccessionPrimary (citable) accession number: C6AM43
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 29, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info