C6AM43 (C6AM43_AGGAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Lysozyme RuleBase RU003788
EC=3.2.1.17 RuleBase RU003788

Gene names

Ordered Locus Names:

NT05HA_0490

Organism

Aggregatibacter aphrophilus (strain NJ8700) (Haemophilus aphrophilus) [Complete proteome] [HAMAP] EMBL ACS96905.1

Taxonomic identifier

634176 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pasteurellales › Pasteurellaceae › Aggregatibacter › Haemophilus aphrophilus

Protein attributes

Sequence length	175 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. RuleBase RU003788
Sequence similarities	Belongs to the glycosyl hydrolase 24 family. RuleBase RU003788

Ontologies

Keywords
Molecular function	Antimicrobial Bacteriolytic enzyme RuleBase RU003788 Glycosidase RuleBase RU003788 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro cytolysis Inferred from electronic annotation. Source: UniProtKB-KW defense response to bacterium Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	lysozyme activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6AM43 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 340322F2746C3880	FASTA	175	19,427
	10 20 30 40 50 60 MLAKCSVVVI AGIILANYPD EIRTGEVGLL VIGNAEDCYR EPYKCPADVW TDGIGNTNDV 70 80 90 100 110 120 VLGRKLSDEE IAERWKDNIK IAENCVNRWA NGKELSQGAF EAAVSITFNV GCSKLKQATL 130 140 150 160 170 FKYARVGDIN LMCNQFPRWV YSQGKVLPGL VKRRNVEKAL CLGLIKSPEQ LSAYR

References

[1]

"Complete genome sequence of Aggregatibacter (Haemophilus) aphrophilus NJ8700." Di Bonaventura M.P., DeSalle R., Pop M., Nagarajan N., Figurski D.H., Fine D.H., Kaplan J.B., Planet P.J. J. Bacteriol. 191:4693-4694(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NJ8700.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001607 Genomic DNA. Translation: ACS96905.1.
RefSeq	YP_003006992.1. NC_012913.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	634176.NT05HA_0490.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACS96905; ACS96905; NT05HA_0490.
GeneID	8121925.
KEGG	aap:NT05HA_0490.
PATRIC	31916079. VBIAggAph86045_0461.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000277068.
KO	K01185.
OMA	QSAFEAM.
Enzyme and pathway databases
BioCyc	AAPH634176:GHVL-480-MONOMER.
Family and domain databases
Gene3D	1.10.530.40. 1 hit.
InterPro	IPR002196. Glyco_hydro_24. IPR023346. Lysozyme-like_dom. IPR023347. Lysozyme_dom. [Graphical view]
Pfam	PF00959. Phage_lysozyme. 1 hit. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C6AM43_AGGAN

Accession

Primary (citable) accession number: C6AM43

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)