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C6AHR9 (C6AHR9_BIFAS) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length455 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201 RuleBase RU004247 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site661Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site3061Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1681Substrate By similarity HAMAP-Rule MF_01201
Binding site3701Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue661N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
C6AHR9 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 7C040E0385AB7865

FASTA45549,253
        10         20         30         40         50         60 
MVCMSVSALE EWQFSSEQGE RNYNQALREY PAQVIVDLAA LRDNMRHLVD ITNREGGPTE 

        70         80         90        100        110        120 
VMGVVKADAY GHGLVPSALA ALAGGATWLG VAQAREALAL RNAGIGVDRA RVLTWVNNPL 

       130        140        150        160        170        180 
HAPYDDLIAA DVDLSVATLT AIQKIAEAAR AVGKPARVHI KVDTGFGRNG FTLAQIDSAI 

       190        200        210        220        230        240 
DLLLPLVDEG VFEIVGQWSH LAVADAPAVG EFVEKTDEQI RVFEEFTSRL HARGIEPRIR 

       250        260        270        280        290        300 
HLANTAATLS RPEIHYDLVR PGVALYGYEA DPAMGTPSKY ELRPAMTLQA QLSSVKNVGA 

       310        320        330        340        350        360 
GEGLSYGRVY VTDEPTSAAI VPVGYADGIH RSASGFNEAG SKHVNKPGAP VRVMTRDGAR 

       370        380        390        400        410        420 
IFHVSGRVCM DQFILDLHGD AENMGVHIGD TVELFGPGRG EDYLEPTADD WARAADTISY 

       430        440        450 
EIFTCLRNRV PRLYANAFEV LDETDLGKLD QSTLL

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References

[1]"Comparison of the complete genome sequences of Bifidobacterium animalis subsp. lactis DSM 10140 and Bl-04."
Barrangou R., Briczinski E.P., Traeger L.L., Loquasto J.R., Richards M., Horvath P., Coute-Monvoisin A.-C., Leyer G., Rendulic S., Steele J.L., Broadbent J.R., Oberg T., Dudley E.G., Schuster S., Romero D.A., Roberts R.F.
J. Bacteriol. 191:4144-4151(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 10140 / JCM 10602 / LMG 18314.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001606 Genomic DNA. Translation: ACS47526.1.
RefSeqYP_002969588.1. NC_012815.1.

3D structure databases

ProteinModelPortalC6AHR9.
ModBaseSearch...

Protein-protein interaction databases

STRING555970.Balat_0584.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS47526; ACS47526; Balat_0584.
GeneID8010206.
KEGGblt:Balat_0584.
PATRIC21110740. VBIBifAni93544_0592.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAGQWQDIA.
ProtClustDBCLSK572926.

Enzyme and pathway databases

BioCycBANI555970:GJ22-584-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6AHR9_BIFAS
AccessionPrimary (citable) accession number: C6AHR9
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 29, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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