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C6AGA9 (C6AGA9_BIFAS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length701 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentbeta-galactosidase complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6AGA9 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: A21166F9B709E366

FASTA70178,245
        10         20         30         40         50         60 
MARAYTDPIL FGAAYYDEYI PRDLDRIDTD MEMMTRAGIN VIRIGESTWS TCEPQPGHFD 

        70         80         90        100        110        120 
WTHIDRALDA ATNAGINVIV GTPTYAVPTW LVAMYPDVLA TTPAGEPHYG ARQIMNIVNP 

       130        140        150        160        170        180 
AYRLYGERVI RSLISHVAQQ PCVIGYQVDN ETKYYDSVSH DMQVMFIKQL RHEFKNDLEA 

       190        200        210        220        230        240 
LNEAYGLDYW SNRINAWEDF PDLTGSINES LRARFDRFRR DQVAEYLAWQ ASIIREYMRD 

       250        260        270        280        290        300 
DQFITHNFDY EWRGHSYGLQ PAVDHFRAAR ALDICGVDIY HPSEDALTGK EIAFGGDMAR 

       310        320        330        340        350        360 
SAGGGNYLVL ETQAQGQHGW LPYPGQLRLQ AYSHLASGAD GIMYWHWHSI HNSFETYWRG 

       370        380        390        400        410        420 
LLSHDFESNP TYEEAGRFGR EIGDPRIGDT LSHLSKRNAV AILASNESLT ALSWFHIETG 

       430        440        450        460        470        480 
FPMGGTLTYN DVLRSIYDAL FELNVEVDFL PADASADQLA GYSLVIAPAL YTTDQQTIDR 

       490        500        510        520        530        540 
LARYVKNGGH LLATMRSFVA DENVKVWHDK APHHLVDIFG MTYNQFTRPM GVSLKCPDTL 

       550        560        570        580        590        600 
ADLAGASAND FIEMLSPAPE THVLAWYDHY AWDSYAAITR HAFGSGDAQW VGTQLQADAW 

       610        620        630        640        650        660 
RTVLAEALSN AGVHTPGMEL AGTVCVRSGT NTAGDTVTYL LNYSGSPITF RAPASGTFLL 

       670        680        690        700 
GHPTDDGEQA VTAETPVTVG DAVTLPRWGV DIIVGRQPTM N

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References

[1]"Comparison of the complete genome sequences of Bifidobacterium animalis subsp. lactis DSM 10140 and Bl-04."
Barrangou R., Briczinski E.P., Traeger L.L., Loquasto J.R., Richards M., Horvath P., Coute-Monvoisin A.-C., Leyer G., Rendulic S., Steele J.L., Broadbent J.R., Oberg T., Dudley E.G., Schuster S., Romero D.A., Roberts R.F.
J. Bacteriol. 191:4144-4151(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 10140 / JCM 10602 / LMG 18314.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001606 Genomic DNA. Translation: ACS47016.1.
RefSeqYP_002969078.1. NC_012815.1.

3D structure databases

ProteinModelPortalC6AGA9.
ModBaseSearch...

Protein-protein interaction databases

STRING555970.Balat_0053.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS47016; ACS47016; Balat_0053.
GeneID8009675.
KEGGblt:Balat_0053.
PATRIC21109612. VBIBifAni93544_0049.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1874.
HOGENOMHOG000114474.
KOK12308.
OMARIAESTW.
ProtClustDBCLSK959066.

Enzyme and pathway databases

BioCycBANI555970:GJ22-53-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR013738. Beta_galactosidase_Trimer.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6AGA9_BIFAS
AccessionPrimary (citable) accession number: C6AGA9
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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