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C6AB60 (C6AB60_BARGA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:dfp EMBL ACS50427.1
Ordered Locus Names:Bgr_00350 EMBL ACS50427.1
OrganismBartonella grahamii (strain as4aup) [Complete proteome] [HAMAP] EMBL ACS50427.1
Taxonomic identifier634504 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBartonellaceaeBartonella

Protein attributes

Sequence length473 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C6AB60 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 8DE803197F2805C4

FASTA47351,276
        10         20         30         40         50         60 
MASITIRNLS PETKEALRIR AAQNGISMEE EVRRLLSNPT PFTTQPSHTS AVEVQSLKSK 

        70         80         90        100        110        120 
SLLLIIGGSI ASYKALDLIR RLQERGAHLK VVMTKAAQKF ITPLAAEALS GGTVYTDLFS 

       130        140        150        160        170        180 
REEEHDIGHI RLARNADLII LAPATANRIA KIANGIGDDL ADCILLAARC PLLIAPAMNP 

       190        200        210        220        230        240 
SMWAHSATIR NVAQLRADGV HIIGPEIGNM AERDEIGYGR MSEPLTIVAT IEALLNVHEK 

       250        260        270        280        290        300 
PLSDRHFIVT SGPTHEPIDP VRYLANRSSG KQGHAIATAL AHLGAKVTLI CGPVNLADPQ 

       310        320        330        340        350        360 
EVKTIHVETA QQMLQAVQTA LPADGAIFVA AVCDWRSQTQ SLHKIKKNAH KIPPSLHMVE 

       370        380        390        400        410        420 
NPDILATIGH APNRPSLVIG FAAETCDIIA NAQKKCVEKG ADFILANDIS LQLDGTSVMG 

       430        440        450        460        470 
ADTNQVYLVS KEKVEQWPHM SKQHVAQKLA NMIVSFFAPQ TPTPHEENIP HFK 

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References

[1]"Run-off replication of host-adaptability genes is associated with gene transfer agents in the genome of mouse-infecting Bartonella grahamii."
Berglund E.C., Frank A.C., Calteau A., Vinnere Pettersson O., Granberg F., Eriksson A.S., Naslund K., Holmberg M., Lindroos H., Andersson S.G.
PLoS Genet. 5:E1000546-E1000546(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: as4aup.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001562 Genomic DNA. Translation: ACS50427.1.
RefSeqYP_002971104.1. NC_012846.1.

3D structure databases

ProteinModelPortalC6AB60.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING634504.Bgr_00350.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS50427; ACS50427; Bgr_00350.
GeneID7997011.
KEGGbgr:Bgr_00350.
PATRIC20539152. VBIBarGra67450_0039.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0452.
HOGENOMHOG000037526.
KOK13038.
OMAREHLDPV.
OrthoDBEOG6FFSBB.

Enzyme and pathway databases

BioCycBGRA634504:GJI6-35-MONOMER.

Family and domain databases

Gene3D3.40.50.10300. 1 hit.
3.40.50.1950. 1 hit.
InterProIPR005252. CoaBC.
IPR007085. DNA/pantothenate-metab_flavo_C.
IPR003382. Flavoprotein.
IPR010985. Ribbon_hlx_hlx.
[Graphical view]
PfamPF04127. DFP. 1 hit.
PF02441. Flavoprotein. 1 hit.
[Graphical view]
SUPFAMSSF102645. SSF102645. 1 hit.
SSF47598. SSF47598. 1 hit.
SSF52507. SSF52507. 1 hit.
TIGRFAMsTIGR00521. coaBC_dfp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6AB60_BARGA
AccessionPrimary (citable) accession number: C6AB60
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)