Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

C6A865 (C6A865_BIFLB) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length490 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ACS46313.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6A865 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 2900FC211E9B7B32

FASTA49054,885
        10         20         30         40         50         60 
MLQCFEWYLP ESHNLWRWLS SQAPSVAHAG FTTAWLPPAY KGQAGDSDVG YGVYDMYDLG 

        70         80         90        100        110        120 
EFDAKGSVPT KYGSRMEYLQ AIRAMQGNGV RVFADIVFNH RMGADGTEPV RTHEVNVDDR 

       130        140        150        160        170        180 
TRSDSTVVER TLNTVYDFPE RGGVYSTFKW NWSDFTGTDY TTDDGTTGIM RFDGKQWSDN 

       190        200        210        220        230        240 
VSHERGNFDY IMGDDVDVNE PEVARELTDW GIWYTTTTGV DGFRLDAVKS IDAGFFAPWL 

       250        260        270        280        290        300 
RTMQRYGNHP GIAVGEYWSG DASELTSYLH DCNHCMMLFD VALHFRFEQA SKNPEGFDLR 

       310        320        330        340        350        360 
GLAADTLYER EPTYACTFVD NHDTQPGQAL ESWVQPWFKP LAYACILLRD NVLPCVFFGD 

       370        380        390        400        410        420 
YYGVPHDLIP PMRFLPHMVW IRAHLLGDQV EAQPGDTAHS LCWVVEGNHP VCVVLNTGSS 

       430        440        450        460        470        480 
EVHRQVRNAA LASHTLIDVC HPDAPATTDT QGQGMMRCPP RSCAIYIDAD DYGVMLEALS 

       490 
GTPAAGTVCA 

« Hide

References

[1]"Comparison of the complete genome sequences of Bifidobacterium animalis subsp. lactis DSM 10140 and Bl-04."
Barrangou R., Briczinski E.P., Traeger L.L., Loquasto J.R., Richards M., Horvath P., Coute-Monvoisin A.C., Leyer G., Rendulic S., Steele J.L., Broadbent J.R., Oberg T., Dudley E.G., Schuster S., Romero D.A., Roberts R.F.
J. Bacteriol. 191:4144-4151(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bl-04 / DGCC2908 / RB 4825 / SD5219.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001515 Genomic DNA. Translation: ACS46313.1.
RefSeqYP_002968375.1. NC_012814.1.

3D structure databases

ProteinModelPortalC6A865.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING580050.Balac_0952.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS46313; ACS46313; Balac_0952.
GeneID8008906.
KEGGblc:Balac_0952.
PATRIC21108131. VBIBifAni84420_0951.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000094847.
KOK01176.
OMAYRDYEEW.
OrthoDBEOG65QWH3.

Enzyme and pathway databases

BioCycBANI580050:GI23-952-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6A865_BIFLB
AccessionPrimary (citable) accession number: C6A865
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)