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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

Balac_0952

Organism
Bifidobacterium animalis subsp. lactis (strain Bl-04 / DGCC2908 / RB 4825 / SD5219)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei226 – 2261NucleophileUniRule annotation
Active sitei256 – 2561Proton donorUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciBANI580050:GI23-952-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:Balac_0952Imported
OrganismiBifidobacterium animalis subsp. lactis (strain Bl-04 / DGCC2908 / RB 4825 / SD5219)Imported
Taxonomic identifieri580050 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000002343: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi580050.Balac_0952.

Structurei

3D structure databases

ProteinModelPortaliC6A865.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

C6A865-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLQCFEWYLP ESHNLWRWLS SQAPSVAHAG FTTAWLPPAY KGQAGDSDVG
60 70 80 90 100
YGVYDMYDLG EFDAKGSVPT KYGSRMEYLQ AIRAMQGNGV RVFADIVFNH
110 120 130 140 150
RMGADGTEPV RTHEVNVDDR TRSDSTVVER TLNTVYDFPE RGGVYSTFKW
160 170 180 190 200
NWSDFTGTDY TTDDGTTGIM RFDGKQWSDN VSHERGNFDY IMGDDVDVNE
210 220 230 240 250
PEVARELTDW GIWYTTTTGV DGFRLDAVKS IDAGFFAPWL RTMQRYGNHP
260 270 280 290 300
GIAVGEYWSG DASELTSYLH DCNHCMMLFD VALHFRFEQA SKNPEGFDLR
310 320 330 340 350
GLAADTLYER EPTYACTFVD NHDTQPGQAL ESWVQPWFKP LAYACILLRD
360 370 380 390 400
NVLPCVFFGD YYGVPHDLIP PMRFLPHMVW IRAHLLGDQV EAQPGDTAHS
410 420 430 440 450
LCWVVEGNHP VCVVLNTGSS EVHRQVRNAA LASHTLIDVC HPDAPATTDT
460 470 480 490
QGQGMMRCPP RSCAIYIDAD DYGVMLEALS GTPAAGTVCA
Length:490
Mass (Da):54,885
Last modified:September 1, 2009 - v1
Checksum:i2900FC211E9B7B32
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001515 Genomic DNA. Translation: ACS46313.1.
RefSeqiYP_002968375.1. NC_012814.1.

Genome annotation databases

EnsemblBacteriaiACS46313; ACS46313; Balac_0952.
GeneIDi8008906.
KEGGiblc:Balac_0952.
PATRICi21108131. VBIBifAni84420_0951.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001515 Genomic DNA. Translation: ACS46313.1.
RefSeqiYP_002968375.1. NC_012814.1.

3D structure databases

ProteinModelPortaliC6A865.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi580050.Balac_0952.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACS46313; ACS46313; Balac_0952.
GeneIDi8008906.
KEGGiblc:Balac_0952.
PATRICi21108131. VBIBifAni84420_0951.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciBANI580050:GI23-952-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bl-04 / DGCC2908 / RB 4825 / SD5219Imported.

Entry informationi

Entry nameiC6A865_BIFLB
AccessioniPrimary (citable) accession number: C6A865
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: February 4, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.