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C6A6Q4 (C6A6Q4_BIFLB) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribose-5-phosphate isomerase A HAMAP-Rule MF_00170
EC=5.3.1.6 HAMAP-Rule MF_00170
Alternative name(s):
Phosphoriboisomerase A HAMAP-Rule MF_00170
Gene names
Name:rpiA HAMAP-Rule MF_00170
Ordered Locus Names:Balac_0420
OrganismBifidobacterium animalis subsp. lactis (strain Bl-04 / DGCC2908 / RB 4825 / SD5219) [Complete proteome] [HAMAP] EMBL ACS45802.1
Taxonomic identifier580050 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium ›

Protein attributes

Sequence length233 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequences

Sequence LengthMass (Da)Tools
C6A6Q4 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 95FDDD23C7FE9B22

FASTA23325,534
        10         20         30         40         50         60 
MDKAQQDAMK KEAGIEAAKL VKSGMIVGLG TGSTVRFLVD ELGRRKQEEG LEFTGVTTSR 

        70         80         90        100        110        120 
RTQEQAEGYG IKIVNIDDVD HIDLCIDGAD EVDKNFNGIK GGGAALLWEK IVAINSNRIV 

       130        140        150        160        170        180 
WIVDASKLVD VIGKFPLPVE VIPFGAMHVI ERMKERGYNP TLRLDAEGKP VRTDENNYVV 

       190        200        210        220        230 
DLHLERIDDP AGLNEDLINM VGVVEDGLFL DMVNEVIVGD PNGPRTLINP NKA

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References

[1]"Comparison of the complete genome sequences of Bifidobacterium animalis subsp. lactis DSM 10140 and Bl-04."
Barrangou R., Briczinski E.P., Traeger L.L., Loquasto J.R., Richards M., Horvath P., Coute-Monvoisin A.-C., Leyer G., Rendulic S., Steele J.L., Broadbent J.R., Oberg T., Dudley E.G., Schuster S., Romero D.A., Roberts R.F.
J. Bacteriol. 191:4144-4151(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bl-04 / DGCC2908 / RB 4825 / SD5219.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001515 Genomic DNA. Translation: ACS45802.1.
RefSeqYP_002967864.1. NC_012814.1.

3D structure databases

ProteinModelPortalC6A6Q4.
ModBaseSearch...

Protein-protein interaction databases

STRING580050.Balac_0420.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS45802; ACS45802; Balac_0420.
GeneID8008395.
KEGGblc:Balac_0420.
PATRIC21107041. VBIBifAni84420_0427.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0120.
HOGENOMHOG000276369.
KOK01807.
OMASTTAYFI.
ProtClustDBPRK00702.

Enzyme and pathway databases

BioCycBANI580050:GI23-469-MONOMER.
UniPathwayUPA00115; UER00412.

Family and domain databases

HAMAPMF_00170. Rib_5P_isom_A.
InterProIPR004788. Ribose5P_isomerase_typA.
IPR020672. Ribose5P_isomerase_typA_subgr.
[Graphical view]
PANTHERPTHR11934. PTHR11934. 1 hit.
PfamPF06026. Rib_5-P_isom_A. 1 hit.
[Graphical view]
TIGRFAMsTIGR00021. rpiA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6A6Q4_BIFLB
AccessionPrimary (citable) accession number: C6A6Q4
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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