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C6A442 (C6A442_THESM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:TSIB_1335 EMBL ACS90387.1
OrganismThermococcus sibiricus (strain MM 739 / DSM 12597) [Complete proteome] [HAMAP] EMBL ACS90387.1
Taxonomic identifier604354 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus

Protein attributes

Sequence length380 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACS90387.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6A442 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 3B863A170FADDCFD

FASTA38044,599
        10         20         30         40         50         60 
MVSSYFKSLL LDLGINKERI EILEGKGGIV EDEFEGIRYL RFKDSVANLR RGTVLFDFHN 

        70         80         90        100        110        120 
IILGFPHIKR VVQLENGVKR VFKRKPFYVE EKVDGYNVRV AQIEGRVFAF TRGGFICPFT 

       130        140        150        160        170        180 
TERIEDFVNM EFFKDYPNLV LCGEMAGPES PYLVEGPPYV KEDIKFFLFD IQEKRTGKSL 

       190        200        210        220        230        240 
PVKERVKIAE EYGIPSVEIF GIYDISKIND LRELIENLRE QRREGIVMKS FDMKRIIKYV 

       250        260        270        280        290        300 
TPYANINDIR IGARVFFELP HGYFMQRIKR LGFYLSEKKI RDAEFEKYAT ALGKALLEPF 

       310        320        330        340        350        360 
VESIWDVSGG EEIAEVFTVR VKHIETAYKM VSHFERLGLK IHIEEIEEMP NDYWRISFKR 

       370        380 
VYPEATREIL ELWNGHAFVD 

« Hide

References

[1]"Metabolic versatility and indigenous origin of the archaeon Thermococcus sibiricus, isolated from a siberian oil reservoir, as revealed by genome analysis."
Mardanov A.V., Ravin N.V., Svetlitchnyi V.A., Beletsky A.V., Miroshnichenko M.L., Bonch-Osmolovskaya E.A., Skryabin K.G.
Appl. Environ. Microbiol. 75:4580-4588(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MM 739 / DSM 12597.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001463 Genomic DNA. Translation: ACS90387.1.
RefSeqYP_002994736.1. NC_012883.1.

3D structure databases

ProteinModelPortalC6A442.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING604354.TSIB_1335.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS90387; ACS90387; TSIB_1335.
GeneID8096336.
KEGGtsi:TSIB_1335.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1423.
HOGENOMHOG000224394.
KOK07468.
OMAEEKMNGY.
ProtClustDBCLSK862643.

Enzyme and pathway databases

BioCycTSIB604354:GHMS-1369-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6A442_THESM
AccessionPrimary (citable) accession number: C6A442
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: April 16, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)