C6A442 (C6A442_THESM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL ACS90387.1

Gene names

Ordered Locus Names:

TSIB_1335 EMBL ACS90387.1

Organism

Thermococcus sibiricus (strain MM 739 / DSM 12597) [Complete proteome] [HAMAP] EMBL ACS90387.1

Taxonomic identifier

604354 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus › Thermococcus sibiricus

Protein attributes

Sequence length	380 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACS90387.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6A442 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 3B863A170FADDCFD	FASTA	380	44,599
	10 20 30 40 50 60 MVSSYFKSLL LDLGINKERI EILEGKGGIV EDEFEGIRYL RFKDSVANLR RGTVLFDFHN 70 80 90 100 110 120 IILGFPHIKR VVQLENGVKR VFKRKPFYVE EKVDGYNVRV AQIEGRVFAF TRGGFICPFT 130 140 150 160 170 180 TERIEDFVNM EFFKDYPNLV LCGEMAGPES PYLVEGPPYV KEDIKFFLFD IQEKRTGKSL 190 200 210 220 230 240 PVKERVKIAE EYGIPSVEIF GIYDISKIND LRELIENLRE QRREGIVMKS FDMKRIIKYV 250 260 270 280 290 300 TPYANINDIR IGARVFFELP HGYFMQRIKR LGFYLSEKKI RDAEFEKYAT ALGKALLEPF 310 320 330 340 350 360 VESIWDVSGG EEIAEVFTVR VKHIETAYKM VSHFERLGLK IHIEEIEEMP NDYWRISFKR 370 380 VYPEATREIL ELWNGHAFVD

References

[1]

"Metabolic versatility and indigenous origin of the archaeon Thermococcus sibiricus, isolated from a siberian oil reservoir, as revealed by genome analysis." Mardanov A.V., Ravin N.V., Svetlitchnyi V.A., Beletsky A.V., Miroshnichenko M.L., Bonch-Osmolovskaya E.A., Skryabin K.G. Appl. Environ. Microbiol. 75:4580-4588(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MM 739 / DSM 12597.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001463 Genomic DNA. Translation: ACS90387.1.
RefSeq	YP_002994736.1. NC_012883.1.
3D structure databases
ProteinModelPortal	C6A442.
ModBase	Search...
Protein-protein interaction databases
STRING	604354.TSIB_1335.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACS90387; ACS90387; TSIB_1335.
GeneID	8096336.
KEGG	tsi:TSIB_1335.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1423.
HOGENOM	HOG000224394.
KO	K07468.
OMA	EEKMNGY.
ProtClustDB	CLSK862643.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR001072. Uncharacterised_MJ0414. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
PRINTS	PR01048. Y414FAMILY.
TIGRFAMs	TIGR01209. TIGR01209. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C6A442_THESM

Accession

Primary (citable) accession number: C6A442

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)