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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

TSIB_1335

Organism
Thermococcus sibiricus (strain MM 739 / DSM 12597)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciTSIB604354:G1GV3-1307-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:TSIB_1335Imported
OrganismiThermococcus sibiricus (strain MM 739 / DSM 12597)Imported
Taxonomic identifieri604354 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
Proteomesi
  • UP000009079 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi604354.TSIB_1335

Structurei

3D structure databases

ProteinModelPortaliC6A442
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini86 – 240RNA_ligaseInterPro annotationAdd BLAST155

Phylogenomic databases

eggNOGiarCOG04218 Archaea
COG1423 LUCA
HOGENOMiHOG000224394
KOiK07468
OMAiEEKMNGY
OrthoDBiPOG093Z048P

Family and domain databases

CDDicd07894 Adenylation_RNA_ligase, 1 hit
InterProiView protein in InterPro
IPR021122 RNA_ligase_dom_REL/Rnl2
IPR001072 RNA_ligase_Pab1020
PfamiView protein in Pfam
PF09414 RNA_ligase, 1 hit
PRINTSiPR01048 Y414FAMILY
TIGRFAMsiTIGR01209 TIGR01209, 1 hit

Sequencei

Sequence statusi: Complete.

C6A442-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSSYFKSLL LDLGINKERI EILEGKGGIV EDEFEGIRYL RFKDSVANLR
60 70 80 90 100
RGTVLFDFHN IILGFPHIKR VVQLENGVKR VFKRKPFYVE EKVDGYNVRV
110 120 130 140 150
AQIEGRVFAF TRGGFICPFT TERIEDFVNM EFFKDYPNLV LCGEMAGPES
160 170 180 190 200
PYLVEGPPYV KEDIKFFLFD IQEKRTGKSL PVKERVKIAE EYGIPSVEIF
210 220 230 240 250
GIYDISKIND LRELIENLRE QRREGIVMKS FDMKRIIKYV TPYANINDIR
260 270 280 290 300
IGARVFFELP HGYFMQRIKR LGFYLSEKKI RDAEFEKYAT ALGKALLEPF
310 320 330 340 350
VESIWDVSGG EEIAEVFTVR VKHIETAYKM VSHFERLGLK IHIEEIEEMP
360 370 380
NDYWRISFKR VYPEATREIL ELWNGHAFVD
Length:380
Mass (Da):44,599
Last modified:September 1, 2009 - v1
Checksum:i3B863A170FADDCFD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001463 Genomic DNA Translation: ACS90387.1
RefSeqiWP_015849605.1, NC_012883.1

Genome annotation databases

EnsemblBacteriaiACS90387; ACS90387; TSIB_1335
GeneIDi8096336
KEGGitsi:TSIB_1335

Similar proteinsi

Entry informationi

Entry nameiC6A442_THESM
AccessioniPrimary (citable) accession number: C6A442
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: March 28, 2018
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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