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C6A442

- C6A442_THESM

UniProt

C6A442 - C6A442_THESM

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

TSIB_1335

Organism
Thermococcus sibiricus (strain MM 739 / DSM 12597)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciTSIB604354:GHMS-1369-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:TSIB_1335Imported
OrganismiThermococcus sibiricus (strain MM 739 / DSM 12597)Imported
Taxonomic identifieri604354 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
ProteomesiUP000009079: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi604354.TSIB_1335.

Structurei

3D structure databases

ProteinModelPortaliC6A442.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

C6A442-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MVSSYFKSLL LDLGINKERI EILEGKGGIV EDEFEGIRYL RFKDSVANLR
60 70 80 90 100
RGTVLFDFHN IILGFPHIKR VVQLENGVKR VFKRKPFYVE EKVDGYNVRV
110 120 130 140 150
AQIEGRVFAF TRGGFICPFT TERIEDFVNM EFFKDYPNLV LCGEMAGPES
160 170 180 190 200
PYLVEGPPYV KEDIKFFLFD IQEKRTGKSL PVKERVKIAE EYGIPSVEIF
210 220 230 240 250
GIYDISKIND LRELIENLRE QRREGIVMKS FDMKRIIKYV TPYANINDIR
260 270 280 290 300
IGARVFFELP HGYFMQRIKR LGFYLSEKKI RDAEFEKYAT ALGKALLEPF
310 320 330 340 350
VESIWDVSGG EEIAEVFTVR VKHIETAYKM VSHFERLGLK IHIEEIEEMP
360 370 380
NDYWRISFKR VYPEATREIL ELWNGHAFVD
Length:380
Mass (Da):44,599
Last modified:September 1, 2009 - v1
Checksum:i3B863A170FADDCFD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001463 Genomic DNA. Translation: ACS90387.1.
RefSeqiYP_002994736.1. NC_012883.1.

Genome annotation databases

EnsemblBacteriaiACS90387; ACS90387; TSIB_1335.
GeneIDi8096336.
KEGGitsi:TSIB_1335.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001463 Genomic DNA. Translation: ACS90387.1 .
RefSeqi YP_002994736.1. NC_012883.1.

3D structure databases

ProteinModelPortali C6A442.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 604354.TSIB_1335.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACS90387 ; ACS90387 ; TSIB_1335 .
GeneIDi 8096336.
KEGGi tsi:TSIB_1335.

Phylogenomic databases

eggNOGi COG1423.
HOGENOMi HOG000224394.
KOi K07468.
OMAi EEKMNGY.

Enzyme and pathway databases

BioCyci TSIB604354:GHMS-1369-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
PRINTSi PR01048. Y414FAMILY.
TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Metabolic versatility and indigenous origin of the archaeon Thermococcus sibiricus, isolated from a siberian oil reservoir, as revealed by genome analysis."
    Mardanov A.V., Ravin N.V., Svetlitchnyi V.A., Beletsky A.V., Miroshnichenko M.L., Bonch-Osmolovskaya E.A., Skryabin K.G.
    Appl. Environ. Microbiol. 75:4580-4588(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MM 739 / DSM 12597Imported.

Entry informationi

Entry nameiC6A442_THESM
AccessioniPrimary (citable) accession number: C6A442
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: October 1, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3