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C6A442

- C6A442_THESM

UniProt

C6A442 - C6A442_THESM

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

TSIB_1335

Organism
Thermococcus sibiricus (strain MM 739 / DSM 12597)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciTSIB604354:GHMS-1369-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:TSIB_1335Imported
    OrganismiThermococcus sibiricus (strain MM 739 / DSM 12597)Imported
    Taxonomic identifieri604354 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
    ProteomesiUP000009079: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi604354.TSIB_1335.

    Structurei

    3D structure databases

    ProteinModelPortaliC6A442.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1423.
    HOGENOMiHOG000224394.
    KOiK07468.
    OMAiEEKMNGY.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    PRINTSiPR01048. Y414FAMILY.
    TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6A442-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVSSYFKSLL LDLGINKERI EILEGKGGIV EDEFEGIRYL RFKDSVANLR    50
    RGTVLFDFHN IILGFPHIKR VVQLENGVKR VFKRKPFYVE EKVDGYNVRV 100
    AQIEGRVFAF TRGGFICPFT TERIEDFVNM EFFKDYPNLV LCGEMAGPES 150
    PYLVEGPPYV KEDIKFFLFD IQEKRTGKSL PVKERVKIAE EYGIPSVEIF 200
    GIYDISKIND LRELIENLRE QRREGIVMKS FDMKRIIKYV TPYANINDIR 250
    IGARVFFELP HGYFMQRIKR LGFYLSEKKI RDAEFEKYAT ALGKALLEPF 300
    VESIWDVSGG EEIAEVFTVR VKHIETAYKM VSHFERLGLK IHIEEIEEMP 350
    NDYWRISFKR VYPEATREIL ELWNGHAFVD 380
    Length:380
    Mass (Da):44,599
    Last modified:September 1, 2009 - v1
    Checksum:i3B863A170FADDCFD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001463 Genomic DNA. Translation: ACS90387.1.
    RefSeqiYP_002994736.1. NC_012883.1.

    Genome annotation databases

    EnsemblBacteriaiACS90387; ACS90387; TSIB_1335.
    GeneIDi8096336.
    KEGGitsi:TSIB_1335.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001463 Genomic DNA. Translation: ACS90387.1 .
    RefSeqi YP_002994736.1. NC_012883.1.

    3D structure databases

    ProteinModelPortali C6A442.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 604354.TSIB_1335.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACS90387 ; ACS90387 ; TSIB_1335 .
    GeneIDi 8096336.
    KEGGi tsi:TSIB_1335.

    Phylogenomic databases

    eggNOGi COG1423.
    HOGENOMi HOG000224394.
    KOi K07468.
    OMAi EEKMNGY.

    Enzyme and pathway databases

    BioCyci TSIB604354:GHMS-1369-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    PRINTSi PR01048. Y414FAMILY.
    TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Metabolic versatility and indigenous origin of the archaeon Thermococcus sibiricus, isolated from a siberian oil reservoir, as revealed by genome analysis."
      Mardanov A.V., Ravin N.V., Svetlitchnyi V.A., Beletsky A.V., Miroshnichenko M.L., Bonch-Osmolovskaya E.A., Skryabin K.G.
      Appl. Environ. Microbiol. 75:4580-4588(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MM 739 / DSM 12597Imported.

    Entry informationi

    Entry nameiC6A442_THESM
    AccessioniPrimary (citable) accession number: C6A442
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3