C6A1R3 (C6A1R3_THESM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNA-binding protein, containing S1 domain EMBL ACS89558.1

Gene names

Ordered Locus Names:

TSIB_0492 EMBL ACS89558.1

Organism

Thermococcus sibiricus (strain MM 739 / DSM 12597) [Complete proteome] [HAMAP] EMBL ACS89558.1

Taxonomic identifier

604354 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus › Thermococcus sibiricus

Protein attributes

Sequence length	199 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	exosome (RNase complex) Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6A1R3 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: C318B5D843342394	FASTA	199	21,969
	10 20 30 40 50 60 MVEPKKKTVE NGELVLPGDY LGVIEEFLPG EGVIEENGEL YAARMGRVKI DLEKIEISVE 70 80 90 100 110 120 PVTDVPPLPQ VGDIVIARVL EVKSQAAIVE LLKIEGRKGY REIATSKLAG IHVSQVKDGY 130 140 150 160 170 180 VESMNSEFKI GDIVRAKVLT NNKSPIQLTT REPDLGVIYA LCSSCKVSLV RKGNALVCPK 190 CGRSESRKLS TYYRKLRLE

References

[1]

"Metabolic versatility and indigenous origin of the archaeon Thermococcus sibiricus, isolated from a siberian oil reservoir, as revealed by genome analysis." Mardanov A.V., Ravin N.V., Svetlitchnyi V.A., Beletsky A.V., Miroshnichenko M.L., Bonch-Osmolovskaya E.A., Skryabin K.G. Appl. Environ. Microbiol. 75:4580-4588(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MM 739 / DSM 12597.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001463 Genomic DNA. Translation: ACS89558.1.
RefSeq	YP_002993907.1. NC_012883.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	604354.TSIB_0492.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACS89558; ACS89558; TSIB_0492.
GeneID	8095479.
KEGG	tsi:TSIB_0492.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1096.
HOGENOM	HOG000222781.
KO	K07573.
OMA	CGNVETR.
ProtClustDB	PRK09521.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR019495. EXOSC1. IPR025721. Exosome_cplx_N_dom. IPR012340. NA-bd_OB-fold. IPR003029. Rbsml_prot_S1_RNA-bd_dom. IPR022967. RNA-binding_domain_S1. [Graphical view]
Pfam	PF14382. ECR1_N. 1 hit. PF10447. EXOSC1. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50126. S1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C6A1R3_THESM

Accession

Primary (citable) accession number: C6A1R3

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)