C5Z796 (C5Z796_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb10g026260 EMBL EER88768.1

Gene names

Name:	Sb10g026260 EMBL EER88768.1
ORF Names:	SORBIDRAFT_10g026260 EMBL EER88768.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare)

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	383 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	lysine biosynthetic process via diaminopimelate Inferred from electronic annotation. Source: InterPro
Molecular function	dihydrodipicolinate synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5Z796 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: E3DF1BBBD2DE074B	FASTA	383	41,703
	10 20 30 40 50 60 MISPRMPTNL LPARTISPVS NGCAATASPS SPSVAARPRR PSSGLQSVTG RGKFPLAAIT 70 80 90 100 110 120 LDDYLPMRST EVKNRTSTDD ITSLRLITAV KTPYLPDGRF DLEAYDSLIN MQIEGGAEGV 130 140 150 160 170 180 IVGGTTGEGH LMSWDEHIML IGHTVNCFGS RIKVIGNTGS NSTREAVHAT EQGFAVGMHA 190 200 210 220 230 240 ALHINPYYGK TSTEGMISHF EAVLPMGPTI IYNVPSRSAQ DISPEVIVAI SGYTNMAGVK 250 260 270 280 290 300 ECVGHERIQQ YADKGITIWS GNDDECHDSR WKYGATGVIS VTSNLVPGLM HSLMYKGENA 310 320 330 340 350 360 MLNEKLLPLM KWLFCQPNPI AVNTALAQLG VARPVFRLPY VPLPLEKRIE FVRIVEAIGR 370 380 ENFVGEKEAQ VLDDDDFVLI SRY

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed: 19189423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000769 Genomic DNA. Translation: EER88768.1.
RefSeq	XP_002437401.1. XM_002437356.1.
UniGene	Sbi.1257.
3D structure databases
ProteinModelPortal	C5Z796.
ModBase	Search...
Protein-protein interaction databases
STRING	C5Z796.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb10g026260.1; Sb10g026260.1; Sb10g026260.
GeneID	8058459.
KEGG	sbi:SORBI_10g026260.
Phylogenomic databases
GeneTree	EPGT00050000017239.
OMA	CEMEDSN.
PhylomeDB	C5Z796.
ProtClustDB	PLN02417.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR002220. Dihydrodipicolinate_synth-like. IPR020625. Dihydrodipicolinate_synth_AS. IPR020624. Dihydrodipicolinate_synth_CS. IPR005263. Dihydrodipicolinate_synth_DapA. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01714.
PANTHER	PTHR12128. DHDPS. 1 hit.
Pfam	PF00701. DHDPS. 1 hit. [Graphical view]
PRINTS	PR00146. DHPICSNTHASE.
TIGRFAMs	TIGR00674. DapA. 1 hit.
PROSITE	PS00665. DHDPS_1. 1 hit. PS00666. DHDPS_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5Z796_SORBI

Accession

Primary (citable) accession number: C5Z796

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	December 14, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)