C5Z650 (C5Z650_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribose-phosphate pyrophosphokinase RuleBase RU004325
EC=2.7.6.1 RuleBase RU004325

Gene names

Name:	Sb10g024310 EMBL EER90051.1
ORF Names:	SORBIDRAFT_10g024310 EMBL EER90051.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	399 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate. RuleBase RU004325
Sequence similarities	Belongs to the ribose-phosphate pyrophosphokinase family. RuleBase RU004324

Ontologies

Keywords
Biological process	Nucleotide biosynthesis RuleBase RU004324
Ligand	Magnesium RuleBase RU004325 Metal-binding RuleBase RU004325
Molecular function	Kinase RuleBase RU004325 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	nucleoside metabolic process Inferred from electronic annotation. Source: InterPro nucleotide biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW ribonucleoside monophosphate biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	kinase activity Inferred from electronic annotation. Source: UniProtKB-KW magnesium ion binding Inferred from electronic annotation. Source: InterPro ribose phosphate diphosphokinase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5Z650 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 6068277A710968AC	FASTA	399	42,949
	10 20 30 40 50 60 MAATAAASGT GSSFLSPRRS RSAASSTVRA AASRFRSPRS VLGSEQLRVA QEGKRMGGAA 70 80 90 100 110 120 EPRAAVWTPK APAPEARLAA LPREPRDSRM KIFSGTANRP LAQEIAAYLG VDLGKILIKR 130 140 150 160 170 180 FADGEIYVQL QESVRGCDVF LIQPTCSPVN ENLMELFIMI DACRRASARS ITVVIPYFGY 190 200 210 220 230 240 ARADRKAQGR EPITAKLAAN LLTEAGSDRV IVCDIHSTQA LGYFDIPVDH IYGQPVILDY 250 260 270 280 290 300 LASKTISEDL VVVSPDVGGV VRARAFAKKL LNARLAIVDK RRQGHNMSEV MNLIGDVKGK 310 320 330 340 350 360 VAILIDDMID TAGTITSAAA LLKQEGAEAV YACCTHAVFS PPAIERLSGG VFEEVIVTNS 370 380 390 ILLPEDKCFP QLTVLSMANL VAETIWHVHR DGSVSSIFQ

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000769 Genomic DNA. Translation: EER90051.1.
RefSeq	XP_002438684.1. XM_002438639.1.
3D structure databases
ProteinModelPortal	C5Z650.
ModBase	Search...
Protein-protein interaction databases
STRING	4558.Sb10g024310.1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb10g024310.1; Sb10g024310.1; Sb10g024310.
GeneID	8083460.
KEGG	sbi:SORBI_10g024310.
Organism-specific databases
Gramene	C5Z650.
Phylogenomic databases
eggNOG	COG0462.
HOGENOM	HOG000210449.
KO	K00948.
ProtClustDB	PLN02369.
Family and domain databases
HAMAP	MF_00583_B. RibP_PPkinase_B.
InterPro	IPR000842. PRib_PP_synth_CS. IPR000836. PRibTrfase_dom. IPR005946. Rib-P_diPkinase. [Graphical view]
Pfam	PF00156. Pribosyltran. 1 hit. [Graphical view]
TIGRFAMs	TIGR01251. ribP_PPkin. 1 hit.
PROSITE	PS00114. PRPP_SYNTHASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5Z650_SORBI

Accession

Primary (citable) accession number: C5Z650

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	May 29, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)